RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 UPP1Q16831 310 aa22.49■■□□□ 1.19
DNMT1-227ENST00000592342 SPATA1Q5VX52 437 aa22.49■■□□□ 1.19
DNMT1-227ENST00000592342 ANKRD40Q6AI12 368 aa22.49■■□□□ 1.19
DNMT1-227ENST00000592342 TMC7Q7Z402 723 aa22.49■■□□□ 1.19
DNMT1-227ENST00000592342 VPS52Q8N1B4 723 aa22.49■■□□□ 1.19
DNMT1-227ENST00000592342 MLKLQ8NB16 471 aa22.49■■□□□ 1.19
DNMT1-227ENST00000592342 CCDC127Q96BQ5 260 aa22.49■■□□□ 1.19
DNMT1-227ENST00000592342 NUB1Q9Y5A7 615 aa22.49■■□□□ 1.19
DNMT1-227ENST00000592342 LAMA2P24043 3122 aaKnown RBP22.49■■□□□ 1.19
DNMT1-227ENST00000592342 TRIM49BA6NDI0 452 aa22.48■■□□□ 1.19
DNMT1-227ENST00000592342 TNNI1P19237 187 aa22.48■■□□□ 1.19
DNMT1-227ENST00000592342 DNAJB1P25685 340 aa22.48■■□□□ 1.19
DNMT1-227ENST00000592342 PSMC2P35998 433 aaKnown RBP22.48■■□□□ 1.19
DNMT1-227ENST00000592342 CASP4P49662 377 aa22.48■■□□□ 1.19
DNMT1-227ENST00000592342 GUCY2FP51841 1108 aa22.48■■□□□ 1.19
DNMT1-227ENST00000592342 PSMD6Q15008 389 aa22.48■■□□□ 1.19
DNMT1-227ENST00000592342 FUT10Q6P4F1 479 aa22.48■■□□□ 1.19
DNMT1-227ENST00000592342 EFCAB13Q8IY85 973 aa22.48■■□□□ 1.19
DNMT1-227ENST00000592342 ANKRD36BP1Q96IX9 119 aa22.48■■□□□ 1.19
DNMT1-227ENST00000592342 TCF25Q9BQ70 676 aa22.48■■□□□ 1.19
DNMT1-227ENST00000592342 DPP3Q9NY33 737 aa22.48■■□□□ 1.19
DNMT1-227ENST00000592342 DACH1Q9UI36 760 aa22.48■■□□□ 1.19
DNMT1-227ENST00000592342 R3HCC1Q9Y3T6 440 aaKnown RBP22.48■■□□□ 1.19
DNMT1-227ENST00000592342 MTCH2Q9Y6C9 303 aa22.48■■□□□ 1.19
DNMT1-227ENST00000592342 SF3B1O75533 1304 aaKnown RBP eCLIP22.48■■□□□ 1.191e-6■■■□□ 18.7
DNMT1-227ENST00000592342 COL4A4P53420 1690 aaPredicted RBP22.48■■□□□ 1.19
DNMT1-227ENST00000592342 TNNC2P02585 160 aa22.47■■□□□ 1.19
DNMT1-227ENST00000592342 LRPAP1P30533 357 aa22.47■■□□□ 1.19
DNMT1-227ENST00000592342 PMS1P54277 932 aaKnown RBP22.47■■□□□ 1.19
DNMT1-227ENST00000592342 NLRP12P59046 1061 aa22.47■■□□□ 1.19
DNMT1-227ENST00000592342 FKBP3Q00688 224 aaKnown RBP22.47■■□□□ 1.19
DNMT1-227ENST00000592342 ELAVL2Q12926 359 aaKnown RBP22.47■■□□□ 1.19
DNMT1-227ENST00000592342 TIGD5Q53EQ6 642 aa22.47■■□□□ 1.19
DNMT1-227ENST00000592342 LMBRD2Q68DH5 695 aaPredicted RBP22.47■■□□□ 1.19
DNMT1-227ENST00000592342 CAVIN1Q6NZI2 390 aaKnown RBP22.47■■□□□ 1.19
DNMT1-227ENST00000592342 SASS6Q6UVJ0 657 aa22.47■■□□□ 1.19
DNMT1-227ENST00000592342 USP37Q86T82 979 aa22.47■■□□□ 1.19
DNMT1-227ENST00000592342 WDR49Q8IV35 697 aa22.47■■□□□ 1.19
DNMT1-227ENST00000592342 MFSD14AQ96MC6 490 aa22.47■■□□□ 1.19
DNMT1-227ENST00000592342 TMEM189-UBE2V1I3L0A0 370 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 TRAPPC3O43617 180 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 SOD2P04179 222 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 EPB41P11171 864 aaKnown RBP22.46■■□□□ 1.19
DNMT1-227ENST00000592342 KRT13P13646 458 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 POU3F3P20264 500 aaPredicted RBP22.46■■□□□ 1.19
DNMT1-227ENST00000592342 STX17P56962 302 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 ERVFC1P60507 584 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 PLPP4Q5VZY2 271 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 PDE12Q6L8Q7 609 aaKnown RBP22.46■■□□□ 1.19
DNMT1-227ENST00000592342 KIAA1841Q6NSI8 718 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 FAM186BQ8IYM0 893 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 PPP2R3CQ969Q6 453 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 EEF2KMTQ96G04 330 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 CGRRF1Q99675 332 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 NGRNQ9NPE2 291 aaKnown RBP22.46■■□□□ 1.19
DNMT1-227ENST00000592342 INTS13Q9NVM9 706 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 TMEM63CQ9P1W3 806 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 TRIP11Q15643 1979 aa22.46■■□□□ 1.19
DNMT1-227ENST00000592342 MAPK13O15264 365 aa22.45■■□□□ 1.18
DNMT1-227ENST00000592342 AKAP3O75969 853 aa22.45■■□□□ 1.18
DNMT1-227ENST00000592342 URODP06132 367 aa22.45■■□□□ 1.18
DNMT1-227ENST00000592342 IRS1P35568 1242 aa22.45■■□□□ 1.18
DNMT1-227ENST00000592342 CAMK1Q14012 370 aa22.45■■□□□ 1.18
DNMT1-227ENST00000592342 SMC1AQ14683 1233 aaKnown RBP22.45■■□□□ 1.18
DNMT1-227ENST00000592342 DUOXA2Q1HG44 320 aa22.45■■□□□ 1.18
DNMT1-227ENST00000592342 KLHL40Q2TBA0 621 aa22.45■■□□□ 1.18
DNMT1-227ENST00000592342 RBM43Q6ZSC3 357 aaKnown RBP22.45■■□□□ 1.18
DNMT1-227ENST00000592342 INTS8Q75QN2 995 aaKnown RBP22.45■■□□□ 1.18
DNMT1-227ENST00000592342 CEP57Q86XR8 500 aa22.45■■□□□ 1.18
DNMT1-227ENST00000592342 TMEM130Q8N3G9 435 aa22.45■■□□□ 1.18
DNMT1-227ENST00000592342 C3orf58Q8NDZ4 430 aa22.45■■□□□ 1.18
DNMT1-227ENST00000592342 HERC2P3Q9BVR0 1158 aa22.45■■□□□ 1.18
DNMT1-227ENST00000592342 GPR62Q9BZJ7 368 aa22.45■■□□□ 1.18
DNMT1-227ENST00000592342 MTMR12Q9C0I1 747 aa22.45■■□□□ 1.18
DNMT1-227ENST00000592342 ZBP1Q9H171 429 aa22.45■■□□□ 1.18
DNMT1-227ENST00000592342 NSUN3Q9H649 340 aaKnown RBP22.45■■□□□ 1.18
DNMT1-227ENST00000592342 CXCL14O95715 111 aa22.44■■□□□ 1.18
DNMT1-227ENST00000592342 KRT19P08727 400 aa22.44■■□□□ 1.18
DNMT1-227ENST00000592342 BRCC3P46736 316 aa22.44■■□□□ 1.18
DNMT1-227ENST00000592342 SKOR2Q2VWA4 1001 aaPredicted RBP22.44■■□□□ 1.18
DNMT1-227ENST00000592342 USP41Q3LFD5 358 aa22.44■■□□□ 1.18
DNMT1-227ENST00000592342 DPCR1Q3MIW9 517 aa22.44■■□□□ 1.18
DNMT1-227ENST00000592342 FAM171A1Q5VUB5 890 aa22.44■■□□□ 1.18
DNMT1-227ENST00000592342 C9orf57Q5W0N0 161 aa22.44■■□□□ 1.18
DNMT1-227ENST00000592342 CSGALNACT2Q8N6G5 542 aa22.44■■□□□ 1.18
DNMT1-227ENST00000592342 PPM1EQ8WY54 764 aa22.44■■□□□ 1.18
DNMT1-227ENST00000592342 POP1Q99575 1024 aaKnown RBP22.44■■□□□ 1.18
DNMT1-227ENST00000592342 MKNK1Q9BUB5 465 aa22.44■■□□□ 1.18
DNMT1-227ENST00000592342 VN1R3Q9BXE9 311 aa22.44■■□□□ 1.18
DNMT1-227ENST00000592342 MRPL17Q9NRX2 175 aaKnown RBP22.44■■□□□ 1.18
DNMT1-227ENST00000592342 SSX2IPQ9Y2D8 614 aa22.44■■□□□ 1.18
DNMT1-227ENST00000592342 MYO9BQ13459 2157 aa22.43■■□□□ 1.18
DNMT1-227ENST00000592342 PLXNA4Q9HCM2 1894 aa22.43■■□□□ 1.18
DNMT1-227ENST00000592342 FSCN2O14926 492 aa22.43■■□□□ 1.18
DNMT1-227ENST00000592342 ITGB3P05106 788 aa22.43■■□□□ 1.18
DNMT1-227ENST00000592342 CTSAP10619 480 aa22.43■■□□□ 1.18
DNMT1-227ENST00000592342 GLUD2P49448 558 aa22.43■■□□□ 1.18
DNMT1-227ENST00000592342 VAMP7P51809 220 aa22.43■■□□□ 1.18
DNMT1-227ENST00000592342 CCDC85BQ15834 202 aaPredicted RBP22.43■■□□□ 1.18
DNMT1-227ENST00000592342 TTI2Q6NXR4 508 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms