RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 STX17P56962 302 aa18.22■□□□□ 0.51
LSM14A-208ENST00000590416 PAK1Q13153 545 aa18.22■□□□□ 0.51
LSM14A-208ENST00000590416 MYBPC2Q14324 1141 aa18.22■□□□□ 0.51
LSM14A-208ENST00000590416 EDRF1Q3B7T1 1238 aa18.22■□□□□ 0.51
LSM14A-208ENST00000590416 ANKRD40Q6AI12 368 aa18.22■□□□□ 0.51
LSM14A-208ENST00000590416 CENPPQ6IPU0 288 aa18.22■□□□□ 0.51
LSM14A-208ENST00000590416 FUT10Q6P4F1 479 aa18.22■□□□□ 0.51
LSM14A-208ENST00000590416 DDX53Q86TM3 631 aaKnown RBP18.22■□□□□ 0.51
LSM14A-208ENST00000590416 EFCAB13Q8IY85 973 aa18.22■□□□□ 0.51
LSM14A-208ENST00000590416 VPS52Q8N1B4 723 aa18.22■□□□□ 0.51
LSM14A-208ENST00000590416 TMEM130Q8N3G9 435 aa18.22■□□□□ 0.51
LSM14A-208ENST00000590416 CCDC127Q96BQ5 260 aa18.22■□□□□ 0.51
LSM14A-208ENST00000590416 MRPL38Q96DV4 380 aaKnown RBP18.22■□□□□ 0.51
LSM14A-208ENST00000590416 LZTS1Q9Y250 596 aa18.22■□□□□ 0.51
LSM14A-208ENST00000590416 R3HCC1Q9Y3T6 440 aaKnown RBP18.22■□□□□ 0.51
LSM14A-208ENST00000590416 NUB1Q9Y5A7 615 aa18.22■□□□□ 0.51
LSM14A-208ENST00000590416 TNNC2P02585 160 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 EPB41P11171 864 aaKnown RBP18.21■□□□□ 0.51
LSM14A-208ENST00000590416 DNAJB1P25685 340 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 RPL9P32969 192 aaKnown RBP18.21■□□□□ 0.51
LSM14A-208ENST00000590416 CASP4P49662 377 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 PMS1P54277 932 aaKnown RBP18.21■□□□□ 0.51
LSM14A-208ENST00000590416 NLRP12P59046 1061 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 LRRC63Q05C16 580 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 NFIL3Q16649 462 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 UPP1Q16831 310 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 ZCWPW2Q504Y3 356 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 SPATA1Q5VX52 437 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 DCLRE1AQ6PJP8 1040 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 SASS6Q6UVJ0 657 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 NT5DC4Q86YG4 428 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 PPM1EQ8WY54 764 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 EEF2KMTQ96G04 330 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 TCF25Q9BQ70 676 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 DMAC2Q9NW81 257 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 DPP3Q9NY33 737 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 DACH1Q9UI36 760 aa18.21■□□□□ 0.51
LSM14A-208ENST00000590416 SF3B1O75533 1304 aaKnown RBP eCLIP18.21■□□□□ 0.515e-7■■■■■ 114.9
LSM14A-208ENST00000590416 CLSTN1O94985 981 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 KRT19P08727 400 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 KRT13P13646 458 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 PSMC2P35998 433 aaKnown RBP18.2■□□□□ 0.5
LSM14A-208ENST00000590416 FKBP3Q00688 224 aaKnown RBP18.2■□□□□ 0.5
LSM14A-208ENST00000590416 PSMD6Q15008 389 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 ZBTB6Q15916 424 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 TIGD5Q53EQ6 642 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 KIAA1841Q6NSI8 718 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 CEP57Q86XR8 500 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 FAM186BQ8IYM0 893 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 MLKLQ8NB16 471 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 CGRRF1Q99675 332 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 HERC2P3Q9BVR0 1158 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 MTMR12Q9C0I1 747 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 LMCD1Q9NZU5 365 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 TMEM63CQ9P1W3 806 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 STK39Q9UEW8 545 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 MTCH2Q9Y6C9 303 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 SZT2Q5T011 3432 aa18.2■□□□□ 0.5
LSM14A-208ENST00000590416 C2CD2LO14523 706 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 SOD2P04179 222 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 URODP06132 367 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 LRPAP1P30533 357 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 IRS1P35568 1242 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 BRCC3P46736 316 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 ERVFC1P60507 584 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 ELAVL2Q12926 359 aaKnown RBP18.19■□□□□ 0.5
LSM14A-208ENST00000590416 SMC1AQ14683 1233 aaKnown RBP18.19■□□□□ 0.5
LSM14A-208ENST00000590416 CCDC85BQ15834 202 aaPredicted RBP18.19■□□□□ 0.5
LSM14A-208ENST00000590416 USP37Q86T82 979 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 WDR49Q8IV35 697 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 C3orf58Q8NDZ4 430 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 PPP2R3CQ969Q6 453 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 FAM84AQ96KN4 292 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 MFSD14AQ96MC6 490 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 GPR62Q9BZJ7 368 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 PCDHGC5Q9Y5F6 944 aa18.19■□□□□ 0.5
LSM14A-208ENST00000590416 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.18■□□□□ 0.5
LSM14A-208ENST00000590416 TMEM189-UBE2V1I3L0A0 370 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 I3L4J1 428 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 TRAPPC3O43617 180 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 AKAP3O75969 853 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 CXCL14O95715 111 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 ITGB3P05106 788 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 TPD52L1Q16890 204 aaPredicted RBP18.18■□□□□ 0.5
LSM14A-208ENST00000590416 DUOXA2Q1HG44 320 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 KLHL40Q2TBA0 621 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 USP41Q3LFD5 358 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 DPCR1Q3MIW9 517 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 FAM171A1Q5VUB5 890 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 C9orf57Q5W0N0 161 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 PDE12Q6L8Q7 609 aaKnown RBP18.18■□□□□ 0.5
LSM14A-208ENST00000590416 CSGALNACT2Q8N6G5 542 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 TMEM174Q8WUU8 243 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 AUTS2Q8WXX7 1259 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 POP1Q99575 1024 aaKnown RBP18.18■□□□□ 0.5
LSM14A-208ENST00000590416 VN1R3Q9BXE9 311 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 ZBP1Q9H171 429 aa18.18■□□□□ 0.5
LSM14A-208ENST00000590416 NSUN3Q9H649 340 aaKnown RBP18.18■□□□□ 0.5
LSM14A-208ENST00000590416 NGRNQ9NPE2 291 aaKnown RBP18.18■□□□□ 0.5
LSM14A-208ENST00000590416 INTS13Q9NVM9 706 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms