RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 TRIM49P0CI25 452 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 TRIM49CP0CI26 452 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 DLATP10515 647 aaKnown RBP13.04□□□□□ -0.32
APOC1-206ENST00000590334 TNNI1P19237 187 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 RPL9P32969 192 aaKnown RBP13.04□□□□□ -0.32
APOC1-206ENST00000590334 KCNJ12Q14500 433 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 RAB30Q15771 203 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 UPP1Q16831 310 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 LUZP1Q86V48 1076 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 C1orf127Q8N9H9 656 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 DDX27Q96GQ7 796 aaKnown RBP13.04□□□□□ -0.32
APOC1-206ENST00000590334 ANKRD36BP1Q96IX9 119 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 FAM193BQ96PV7 902 aaPredicted RBP13.04□□□□□ -0.32
APOC1-206ENST00000590334 PBX4Q9BYU1 374 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 DPP3Q9NY33 737 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 HCSTQ9UBK5 93 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 DNAJB4Q9UDY4 337 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 TUBGCP4Q9UGJ1 667 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 ITGA11Q9UKX5 1188 aa13.04□□□□□ -0.32
APOC1-206ENST00000590334 YBX2Q9Y2T7 364 aaKnown RBP13.04□□□□□ -0.32
APOC1-206ENST00000590334 COL4A4P53420 1690 aaPredicted RBP13.04□□□□□ -0.32
APOC1-206ENST00000590334 ATG2AQ2TAZ0 1938 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 LRRC10BA6NIK2 292 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 BECN2A8MW95 431 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 TMEM189-UBE2V1I3L0A0 370 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 TNNC2P02585 160 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 GALTP07902 379 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 TMEM191BP0C7N4 346 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 MYOGP15173 224 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 LAG3P18627 525 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 PBX2P40425 430 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 BCAR1P56945 870 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 TFAMQ00059 246 aaKnown RBP13.03□□□□□ -0.32
APOC1-206ENST00000590334 PPP3CAQ08209 521 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 ZACNQ401N2 412 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 TRAPPC11Q7Z392 1133 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 TUBGCP2Q9BSJ2 902 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 MTMR12Q9C0I1 747 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 GOLGA2P5Q9HBQ8 144 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 TMEM8AQ9HCN3 771 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 MAGEC2Q9UBF1 373 aaPredicted RBP13.03□□□□□ -0.32
APOC1-206ENST00000590334 LIMA1Q9UHB6 759 aaKnown RBP13.03□□□□□ -0.32
APOC1-206ENST00000590334 MSRAQ9UJ68 235 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 RWDD3Q9Y3V2 267 aa13.03□□□□□ -0.32
APOC1-206ENST00000590334 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.03□□□□□ -0.32
APOC1-206ENST00000590334 VWA8A3KMH1 1905 aa13.02□□□□□ -0.32
APOC1-206ENST00000590334 PIRO00625 290 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 NRP1O14786 923 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 ZC3H11AO75152 810 aaKnown RBP eCLIP13.02□□□□□ -0.33
APOC1-206ENST00000590334 ALDH2P05091 517 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 CA3P07451 260 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 PRKCSHP14314 528 aaPredicted RBP13.02□□□□□ -0.33
APOC1-206ENST00000590334 PAX3P23760 479 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 MTIF2P46199 727 aaKnown RBP13.02□□□□□ -0.33
APOC1-206ENST00000590334 SLC11A1P49279 550 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 CLCNKBP51801 687 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 KCNH2Q12809 1159 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 MAN2A1Q16706 1144 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 HSP90AA4PQ58FG1 418 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 DCAF17Q5H9S7 520 aaPredicted RBP13.02□□□□□ -0.33
APOC1-206ENST00000590334 MIIPQ5JXC2 388 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 TCERG1LQ5VWI1 586 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 TDRD10Q5VZ19 366 aaKnown RBP13.02□□□□□ -0.33
APOC1-206ENST00000590334 C9orf57Q5W0N0 161 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 LMBRD2Q68DH5 695 aaPredicted RBP13.02□□□□□ -0.33
APOC1-206ENST00000590334 KCNT2Q6UVM3 1135 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 SV2AQ7L0J3 742 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 COLGALT1Q8NBJ5 622 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 SAMD11Q96NU1 681 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 PAAF1Q9BRP4 392 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 AAASQ9NRG9 546 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 SIX4Q9UIU6 781 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 COQ4Q9Y3A0 265 aa13.02□□□□□ -0.33
APOC1-206ENST00000590334 CASTOR2A6NHX0 329 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 C5orf67F2Z3F1 127 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 GOLGA6L19H0YKK7 550 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 PODXLO00592 558 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 P4HA2O15460 535 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 ARHGEF15O94989 841 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 VNN1O95497 513 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 STAU1O95793 577 aaKnown RBP13.01□□□□□ -0.33
APOC1-206ENST00000590334 EFEMP2O95967 443 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 AFPP02771 609 aaKnown RBP13.01□□□□□ -0.33
APOC1-206ENST00000590334 ITGB3P05106 788 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 DNAJB2P25686 324 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 BMPR1AP36894 532 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 OR1G1P47890 313 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 GCLMP48507 274 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 FMO5P49326 533 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 ALDH7A1P49419 539 aaKnown RBP13.01□□□□□ -0.33
APOC1-206ENST00000590334 GUCY2FP51841 1108 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 ERVK-21P61565 698 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 TPM4P67936 248 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 TAP1Q03518 808 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 KRT31Q15323 416 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 CBWD6Q4V339 395 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 CBWD3Q5JTY5 395 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 CBWD5Q5RIA9 395 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 KRT39Q6A163 491 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 DCLRE1AQ6PJP8 1040 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms