RNA–Protein interactions for RNA: ENST00000590135.5

U2AF1L4-213, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 2

Gene U2AF1L4, Length 1,763 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-213	ENST00000590135	HOMER3	Q9NSC5	361 aa		12.8	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	PNMA3	Q9UL41	463 aa		12.8	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	PLAA	Q9Y263	795 aa		12.8	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	CSAD	Q9Y600	493 aa		12.8	□□□□□ -0.36
U2AF1L4-213	ENST00000590135		A0A0B4J269	797 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135		H0YGN5	161 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	DAPK3	O43293	454 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	DLAT	P10515	647 aa	Known RBP	12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	GLRA2	P23416	452 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	CDR1	P51861	262 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	CENPC	Q03188	943 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	MESD	Q14696	234 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	VARS2	Q5ST30	1063 aa	Known RBP	12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	METTL7B	Q6UX53	244 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	CYFIP1	Q7L576	1253 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	HOOK3	Q86VS8	718 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	SLC13A5	Q86YT5	568 aa	Predicted RBP	12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	JAML	Q86YT9	394 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	TRPM4	Q8TD43	1214 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	ARL8A	Q96BM9	186 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	FAXDC2	Q96IV6	333 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	TXLNGY	Q9BZA5	131 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	MTRF1L	Q9UGC7	380 aa	Known RBP	12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	FEZ2	Q9UHY8	353 aa	Predicted RBP	12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	NFS1	Q9Y697	457 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	SNCAIP	Q9Y6H5	919 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	ATXN2	Q99700	1313 aa	Known RBP	12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	ADCY3	O60266	1144 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	MAF	O75444	373 aa	Predicted RBP	12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	USP2	O75604	605 aa	Predicted RBP	12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	FARP2	O94887	1054 aa	Predicted RBP	12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	HLA-DRA	P01903	254 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	CYP1A1	P04798	512 aa	Predicted RBP	12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	NUDT17	P0C025	328 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	KRT5	P13647	590 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	NR1D1	P20393	614 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	PIK3CA	P42336	1068 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	SLC26A2	P50443	739 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	EMP3	P54852	163 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	LIN9	Q5TKA1	542 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	NLRP7	Q8WX94	980 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	TATDN2	Q93075	761 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	HINFP	Q9BQA5	517 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	C2orf40	Q9H1Z8	148 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	LRRC19	Q9H756	370 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	MRPL47	Q9HD33	250 aa	Known RBP	12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	ZDHHC18	Q9NUE0	388 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	CNOT8	Q9UFF9	292 aa	Known RBP	12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	SCIN	Q9Y6U3	715 aa		12.79	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	ADGRA2	Q96PE1	1338 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	PASK	Q96RG2	1323 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	LRRC37A2	A6NM11	1700 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	CXCL11	O14625	94 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	FSCN2	O14926	492 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	KRT14	P02533	472 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	TNNI1	P19237	187 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	ATP4A	P20648	1035 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	UBA1	P22314	1058 aa	Known RBP	12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	PTGIR	P43119	386 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	MXD4	Q14582	209 aa	Predicted RBP	12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	SLMAP	Q14BN4	828 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	DNAJC21	Q5F1R6	531 aa	Known RBP	12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	CEP85L	Q5SZL2	805 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	IER5	Q5VY09	327 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	MCOLN2	Q8IZK6	566 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	PRELID2	Q8N945	189 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	ATP8B4	Q8TF62	1192 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	SEPT1	Q8WYJ6	367 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	MAGOHB	Q96A72	148 aa	Known RBP	12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	IMPG2	Q9BZV3	1241 aa		12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	TOPORS	Q9NS56	1045 aa	Predicted RBP	12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	RBAK	Q9NYW8	714 aa	Predicted RBP	12.78	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	GRIN2D	O15399	1336 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	ARHGAP33	O14559	1287 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	DNAJB2	P25686	324 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	MAPK4	P31152	587 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	NSF	P46459	744 aa	Known RBP	12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	IREB2	P48200	963 aa	Known RBP	12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	STAT5B	P51692	787 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	GNGT1	P63211	74 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	SP2	Q02086	613 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	CUL2	Q13617	745 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	VGLL4	Q14135	290 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	UAP1	Q16222	522 aa	Predicted RBP	12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	CDCA2	Q69YH5	1023 aa	Predicted RBP	12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	PHF13	Q86YI8	300 aa	Predicted RBP	12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	WDR49	Q8IV35	697 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	BRSK2	Q8IWQ3	736 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	ASAP3	Q8TDY4	903 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	GRK7	Q8WTQ7	553 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	KRT35	Q92764	455 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	POP1	Q99575	1024 aa	Known RBP	12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	BEGAIN	Q9BUH8	593 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	MSTO1	Q9BUK6	570 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	TMEM109	Q9BVC6	243 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	MRPL4	Q9BYD3	311 aa	Known RBP	12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	SPATC1L	Q9H0A9	340 aa		12.77	□□□□□ -0.36
U2AF1L4-213	ENST00000590135	DOCK5	Q9H7D0	1870 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms