RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 GPRC5DQ9NZD1 345 aa12.02□□□□□ -0.48
TOP3A-217ENST00000584582 SAMD15Q9P1V8 674 aa12.02□□□□□ -0.48
TOP3A-217ENST00000584582 PARP2Q9UGN5 583 aa12.02□□□□□ -0.48
TOP3A-217ENST00000584582 TTLL3Q9Y4R7 772 aa12.02□□□□□ -0.48
TOP3A-217ENST00000584582 DOCK2Q92608 1830 aa12.02□□□□□ -0.48
TOP3A-217ENST00000584582 BCORQ6W2J9 1755 aa12.02□□□□□ -0.48
TOP3A-217ENST00000584582 AGPSO00116 658 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 B4GALT5O43286 388 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 EXTL3O43909 919 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 GLRA2P23416 452 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 GPC3P51654 580 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 NFX1Q12986 1120 aaKnown RBP12.02□□□□□ -0.49
TOP3A-217ENST00000584582 FAM47EQ6ZV65 393 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 RFX6Q8HWS3 928 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 MAP4K3Q8IVH8 894 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 CCDC13Q8IYE1 715 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 EPS8L3Q8TE67 593 aaKnown RBP12.02□□□□□ -0.49
TOP3A-217ENST00000584582 TEPSINQ96N21 525 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 CARD9Q9H257 536 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 SLITRK6Q9H5Y7 841 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 FAM49BQ9NUQ9 324 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 ZNF214Q9UL59 606 aaPredicted RBP12.02□□□□□ -0.49
TOP3A-217ENST00000584582 HEY1Q9Y5J3 304 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 CAND2O75155 1236 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 CXCL8P10145 99 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 PSMC1P62191 440 aaKnown RBP12.02□□□□□ -0.49
TOP3A-217ENST00000584582 FMO1Q01740 532 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 CATSPERGQ6ZRH7 1159 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 SLC13A5Q86YT5 568 aaPredicted RBP12.02□□□□□ -0.49
TOP3A-217ENST00000584582 LRRN4Q8WUT4 740 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 ELAC2Q9BQ52 826 aaKnown RBP12.02□□□□□ -0.49
TOP3A-217ENST00000584582 ASCC2Q9H1I8 757 aaPredicted RBP12.02□□□□□ -0.49
TOP3A-217ENST00000584582 MRPL47Q9HD33 250 aaKnown RBP12.02□□□□□ -0.49
TOP3A-217ENST00000584582 XPNPEP1Q9NQW7 623 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 CHST7Q9NS84 486 aa12.02□□□□□ -0.49
TOP3A-217ENST00000584582 SLX4Q8IY92 1834 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 H7C0C1 242 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 RNF8O76064 485 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 CFHP08603 1231 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 RARAP10276 462 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 ATP5OP48047 213 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 ZNF131P52739 623 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 HIRAP54198 1017 aaPredicted RBP12.01□□□□□ -0.49
TOP3A-217ENST00000584582 CUL2Q13617 745 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 BBS9Q3SYG4 887 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 ANKMY2Q8IV38 441 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 ADPGKQ9BRR6 497 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 SAYSD1Q9NPB0 183 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 NKIRAS1Q9NYS0 192 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 BTBD7Q9P203 1132 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 ATP2A1O14983 1001 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 LCA5LO95447 670 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 SHBGP04278 402 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 STX2P32856 288 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 LSP1P33241 339 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 ALDH5A1P51649 535 aaPredicted RBP12.01□□□□□ -0.49
TOP3A-217ENST00000584582 GPS1Q13098 491 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 ACAD10Q6JQN1 1059 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 TMEM35BQ8NCS4 154 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 ACTRT1Q8TDG2 376 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 AGAP1Q9UPQ3 857 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 DCDC2CA8MYV0 355 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 M0QYV0 167 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 LDHAP00338 332 aaKnown RBP12.01□□□□□ -0.49
TOP3A-217ENST00000584582 OSBPP22059 807 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 CHRNA3P32297 505 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 FAM133BQ5BKY9 247 aaKnown RBP12.01□□□□□ -0.49
TOP3A-217ENST00000584582 C9orf131Q5VYM1 1079 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 TDRD10Q5VZ19 366 aaKnown RBP12.01□□□□□ -0.49
TOP3A-217ENST00000584582 CASC4Q6P4E1 433 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 KCTD6Q8NC69 237 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 WNT8AQ9H1J5 351 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 GTF3C4Q9UKN8 822 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 UBE4BO95155 1302 aa12.01□□□□□ -0.49
TOP3A-217ENST00000584582 MYH7BA7E2Y1 1941 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12□□□□□ -0.49
TOP3A-217ENST00000584582 HMGB1P1B2RPK0 211 aaPredicted RBP12□□□□□ -0.49
TOP3A-217ENST00000584582 SLC26A4O43511 780 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 ITGB3P05106 788 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 KCNA2P16389 499 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 KIZQ2M2Z5 673 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 CATSPER4Q7RTX7 472 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 LRRC57Q8N9N7 239 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 OR6B3Q8NGW1 331 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 IPO4Q8TEX9 1081 aaKnown RBP12□□□□□ -0.49
TOP3A-217ENST00000584582 FIZ1Q96SL8 496 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 POLIQ9UNA4 740 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 O00370 1275 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 PHF2O75151 1096 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 SPAG7O75391 227 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 PPP1R37O75864 691 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 CST3P01034 146 aaPredicted RBP12□□□□□ -0.49
TOP3A-217ENST00000584582 PDGFRBP09619 1106 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 FDX1P10109 184 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 MAPTP10636 758 aaKnown RBP12□□□□□ -0.49
TOP3A-217ENST00000584582 DESP17661 470 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 RPL21P46778 160 aaKnown RBP12□□□□□ -0.49
TOP3A-217ENST00000584582 JAM2P57087 298 aa12□□□□□ -0.49
TOP3A-217ENST00000584582 RPL7AP62424 266 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms