RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 RABL3Q5HYI8 236 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 CCSAPQ6IQ19 270 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 ZNF627Q7L945 461 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 OVCH2Q7RTZ1 564 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 CPT1CQ8TCG5 803 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 NSUN6Q8TEA1 469 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 CYFIP2Q96F07 1278 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 TMX3Q96JJ7 454 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 CDC5LQ99459 802 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 CGRRF1Q99675 332 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 VRK1Q99986 396 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 SENP6Q9GZR1 1112 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 KMT5AQ9NQR1 393 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 MAN1C1Q9NR34 630 aa5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 AJAP1Q9UKB5 411 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-205ENST00000581383 WNT10BO00744 389 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 SGTAO43765 313 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 PPFIA4O75335 1185 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 SCAF4O95104 1147 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 AMY1AP04745 511 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 HTR1BP28222 390 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 USP14P54578 494 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 NANOS3P60323 173 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 GALEQ14376 348 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 KHDC1Q4VXA5 237 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 LY6G5CQ5SRR4 150 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 PRAMEF14Q5SWL7 426 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 THEMIS2Q5TEJ8 643 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 PPP4R4Q6NUP7 873 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 KCNV1Q6PIU1 500 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 LDLRAD3Q86YD5 345 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 TRMT2AQ8IZ69 625 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 ZGPATQ8N5A5 531 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 RGMAQ96B86 450 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 DMRTA2Q96SC8 542 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 LRFN3Q9BTN0 628 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 FAM204AQ9H8W3 233 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 LANCL2Q9NS86 450 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 DMRT1Q9Y5R6 373 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 NR2E3Q9Y5X4 410 aa5.95□□□□□ -1.46
SMCHD1-205ENST00000581383 ZMYM3Q14202 1370 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 B3GALT2O43825 422 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 GPR32O75388 356 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 TUSC2O75896 110 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 DDCP20711 480 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 FPR1P21462 350 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 PCSK1P29120 753 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 NOGQ13253 232 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 TOB2Q14106 344 aaPredicted RBP5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 GADL1Q6ZQY3 521 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 CHST15Q7LFX5 561 aaPredicted RBP5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 C3orf20Q8ND61 904 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 PROKR1Q8TCW9 393 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 MRGPRX4Q96LA9 322 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 ARMT1Q9H993 441 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 TMEM140Q9NV12 185 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 FAM50BQ9Y247 325 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 POLHQ9Y253 713 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 PCDHA3Q9Y5H8 950 aa5.94□□□□□ -1.46
SMCHD1-205ENST00000581383 TPP1O14773 563 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 SLC16A6O15403 523 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 ABHD16AO95870 558 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 TRIM27P14373 513 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 BMP5P22003 454 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 GUCY1A2P33402 732 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 HK3P52790 923 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 ZNF280AP59817 542 aaPredicted RBP5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 SLC25A3Q00325 362 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 APBA1Q02410 837 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 TIGD2Q4W5G0 525 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 COBLL1Q53SF7 1204 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 CYB5RLQ6IPT4 315 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 NPNTQ6UXI9 565 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 CCDC149Q6ZUS6 474 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 PDZD4Q76G19 769 aaPredicted RBP5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 DAAM2Q86T65 1068 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 ULK2Q8IYT8 1036 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 SH2D3CQ8N5H7 860 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 FAM156AQ8NDB6 213 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 MDGA1Q8NFP4 955 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 KLHDC4Q8TBB5 520 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 IFI44Q8TCB0 444 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 CEP95Q96GE4 821 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 SARGQ9BW04 601 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 PCGF6Q9BYE7 350 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 B3GNT5Q9BYG0 378 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 TMEM60Q9H2L4 133 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 RUVBL1Q9Y265 456 aaKnown RBP5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 STXBP5LQ9Y2K9 1186 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 ACTL7AQ9Y615 435 aa5.93□□□□□ -1.46
SMCHD1-205ENST00000581383 H3BUI4 141 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 PLIN1O60240 522 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 RHOBTB3O94955 611 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 IL2RBP14784 551 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 RHCEP18577 417 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 SMARCA1P28370 1054 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 GZMKP49863 264 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 ATP8B2P98198 1209 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 RHDQ02161 417 aa5.92□□□□□ -1.46
SMCHD1-205ENST00000581383 MTM1Q13496 603 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms