RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 FBXO2Q9UK22 296 aaPredicted RBP23.24■■□□□ 1.31
CSNK1D-216ENST00000581108 PIEZO1Q92508 2521 aa23.23■■□□□ 1.31
CSNK1D-216ENST00000581108 CLTAP09496 248 aa23.23■■□□□ 1.31
CSNK1D-216ENST00000581108 HNRNPA1P09651 372 aaKnown RBP eCLIP23.23■■□□□ 1.31
CSNK1D-216ENST00000581108 TNFSF9P41273 254 aa23.23■■□□□ 1.31
CSNK1D-216ENST00000581108 LIG4P49917 911 aa23.23■■□□□ 1.31
CSNK1D-216ENST00000581108 NTHL1P78549 312 aa23.23■■□□□ 1.31
CSNK1D-216ENST00000581108 SPAG1Q07617 926 aa23.23■■□□□ 1.31
CSNK1D-216ENST00000581108 GET4Q7L5D6 327 aaPredicted RBP23.23■■□□□ 1.31
CSNK1D-216ENST00000581108 TMEM130Q8N3G9 435 aa23.23■■□□□ 1.31
CSNK1D-216ENST00000581108 SLC7A14Q8TBB6 771 aa23.23■■□□□ 1.31
CSNK1D-216ENST00000581108 CLIC6Q96NY7 704 aa23.23■■□□□ 1.31
CSNK1D-216ENST00000581108 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.23■■□□□ 1.31
CSNK1D-216ENST00000581108 NUB1Q9Y5A7 615 aa23.23■■□□□ 1.31
CSNK1D-216ENST00000581108 SRPRBQ9Y5M8 271 aaKnown RBP23.23■■□□□ 1.31
CSNK1D-216ENST00000581108 HNRNPDLO14979 420 aaKnown RBP23.22■■□□□ 1.31
CSNK1D-216ENST00000581108 CCL16O15467 120 aa23.22■■□□□ 1.31
CSNK1D-216ENST00000581108 LAMP2P13473 410 aa23.22■■□□□ 1.31
CSNK1D-216ENST00000581108 NMT1P30419 496 aaKnown RBP23.22■■□□□ 1.31
CSNK1D-216ENST00000581108 VARS2Q5ST30 1063 aaKnown RBP23.22■■□□□ 1.31
CSNK1D-216ENST00000581108 FIZ1Q96SL8 496 aa23.22■■□□□ 1.31
CSNK1D-216ENST00000581108 TUBGCP4Q9UGJ1 667 aa23.22■■□□□ 1.31
CSNK1D-216ENST00000581108 POLIQ9UNA4 740 aa23.22■■□□□ 1.31
CSNK1D-216ENST00000581108 MTMR6Q9Y217 621 aa23.22■■□□□ 1.31
CSNK1D-216ENST00000581108 NOTCH4Q99466 2003 aa23.21■■□□□ 1.31
CSNK1D-216ENST00000581108 TTC26A0AVF1 554 aa23.21■■□□□ 1.31
CSNK1D-216ENST00000581108 K7ELQ4 463 aaPredicted RBP23.21■■□□□ 1.31
CSNK1D-216ENST00000581108 NARSO43776 548 aaKnown RBP23.21■■□□□ 1.31
CSNK1D-216ENST00000581108 TBCAO75347 108 aaKnown RBP23.21■■□□□ 1.31
CSNK1D-216ENST00000581108 PIGRP01833 764 aa23.21■■□□□ 1.31
CSNK1D-216ENST00000581108 FSHRP23945 695 aa23.21■■□□□ 1.31
CSNK1D-216ENST00000581108 HOXA9P31269 272 aa23.21■■□□□ 1.31
CSNK1D-216ENST00000581108 UVSSAQ2YD98 709 aa23.21■■□□□ 1.31
CSNK1D-216ENST00000581108 ZBTB41Q5SVQ8 909 aa23.21■■□□□ 1.31
CSNK1D-216ENST00000581108 ALYREFQ86V81 257 aaKnown RBP23.21■■□□□ 1.31
CSNK1D-216ENST00000581108 PRRX2Q99811 253 aa23.21■■□□□ 1.31
CSNK1D-216ENST00000581108 PLEKHA5Q9HAU0 1116 aa23.21■■□□□ 1.31
CSNK1D-216ENST00000581108 DUSP12Q9UNI6 340 aa23.21■■□□□ 1.31
CSNK1D-216ENST00000581108 FAM189A1O60320 539 aa23.2■■□□□ 1.3
CSNK1D-216ENST00000581108 SCP2P22307 547 aa23.2■■□□□ 1.3
CSNK1D-216ENST00000581108 GTF2BQ00403 316 aa23.2■■□□□ 1.3
CSNK1D-216ENST00000581108 TCF15Q12870 199 aa23.2■■□□□ 1.3
CSNK1D-216ENST00000581108 ZC2HC1CQ53FD0 456 aaPredicted RBP23.2■■□□□ 1.3
CSNK1D-216ENST00000581108 SLC44A3Q8N4M1 653 aa23.2■■□□□ 1.3
CSNK1D-216ENST00000581108 ST13P5Q8NFI4 369 aaPredicted RBP23.2■■□□□ 1.3
CSNK1D-216ENST00000581108 KIF12Q96FN5 646 aa23.2■■□□□ 1.3
CSNK1D-216ENST00000581108 MFSD1Q9H3U5 465 aa23.2■■□□□ 1.3
CSNK1D-216ENST00000581108 CCDC39Q9UFE4 941 aa23.2■■□□□ 1.3
CSNK1D-216ENST00000581108 LACTBL1A8MY62 500 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 SYN3O14994 580 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 TBC1D4O60343 1298 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 XYLBO75191 536 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 MCM4P33991 863 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 ARPP19P56211 112 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 ROR1Q01973 937 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 MRPL58Q14197 206 aaKnown RBP23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 ZBTB6Q15916 424 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 SLC8B1Q6J4K2 584 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 SLC39A4Q6P5W5 647 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 DYMQ7RTS9 669 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 TMEM105Q8N8V8 129 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 KRI1Q8N9T8 703 aaKnown RBP23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 ZNF461Q8TAF7 563 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 SUSD3Q96L08 255 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 USP28Q96RU2 1077 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 HCFC1R1Q9NWW0 138 aa23.19■■□□□ 1.3
CSNK1D-216ENST00000581108 A0A0B4J269 797 aa23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 WDR27A2RRH5 827 aa23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 ANKRD63C9JTQ0 380 aa23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 OGTO15294 1046 aa23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 STX6O43752 255 aa23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 ABLIM3O94929 683 aa23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 PTPN5P54829 565 aa23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 PPP2R3AQ06190 1150 aa23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 ENOX2Q16206 610 aaKnown RBP23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 KYAT1Q16773 422 aa23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 RRAGBQ5VZM2 374 aa23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 NXPE3Q969Y0 559 aa23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 RPF1Q9H9Y2 349 aaKnown RBP23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 STK17AQ9UEE5 414 aa23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 FBXL21Q9UKT6 434 aa23.18■■□□□ 1.3
CSNK1D-216ENST00000581108 ANHXE9PGG2 379 aa23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 H7C4K7 107 aa23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 CFHP08603 1231 aa23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 SLC39A14Q15043 492 aa23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 ASTLQ6HA08 431 aaPredicted RBP23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 MAP4K3Q8IVH8 894 aa23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 ITFG1Q8TB96 612 aa23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 DDX12PQ92771 950 aa23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 FAM212AQ96EL1 285 aa23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 PHOX2BQ99453 314 aa23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 MSTO1Q9BUK6 570 aa23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 PANK2Q9BZ23 570 aa23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 ZSCAN16Q9H4T2 348 aaPredicted RBP23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 DNMT3BQ9UBC3 853 aaKnown RBP23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 FBXL5Q9UKA1 691 aa23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 UBQLN1Q9UMX0 589 aaKnown RBP23.17■■□□□ 1.3
CSNK1D-216ENST00000581108 CACNA1HO95180 2353 aa23.16■■□□□ 1.3
CSNK1D-216ENST00000581108 ANK1P16157 1881 aa23.16■■□□□ 1.3
CSNK1D-216ENST00000581108 MYMKA6NI61 221 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms