RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 NRN1LQ496H8 165 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 FLYWCH1Q4VC44 716 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 ARHGAP29Q52LW3 1261 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 USP39Q53GS9 565 aaKnown RBP2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 HSP90AB2PQ58FF8 381 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 RABL3Q5HYI8 236 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 RNF207Q6ZRF8 634 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 C14orf80Q86SX3 495 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 SYT12Q8IV01 421 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 C1orf210Q8IVY1 113 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 AOPEPQ8N6M6 819 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 ZBTB34Q8NCN2 500 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 IL17DQ8TAD2 202 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 TTC8Q8TAM2 541 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 KLHDC4Q8TBB5 520 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 EXTL1Q92935 676 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 MTFMTQ96DP5 389 aaKnown RBP2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 CCDC136Q96JN2 1154 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 PHACTR3Q96KR7 559 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 C8orf48Q96LL4 319 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 CGRRF1Q99675 332 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 ACO2Q99798 780 aaKnown RBP2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 PCGF6Q9BYE7 350 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 GSTO2Q9H4Y5 243 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 WDCPQ9H6R7 721 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 FBXO34Q9NWN3 711 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 GABBR1Q9UBS5 961 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 ABCF2Q9UG63 623 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 FEZ2Q9UHY8 353 aaPredicted RBP2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 SORCS3Q9UPU3 1222 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 PCDHA3Q9Y5H8 950 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 NR2E3Q9Y5X4 410 aa2.84□□□□□ -1.95
PTP4A1-204ENST00000578299 NCANO14594 1321 aa2.84□□□□□ -1.96
PTP4A1-204ENST00000578299 GAGE12BA1L429 117 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 CDHR4A6H8M9 788 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 GAGE12HA6NDE8 117 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 VSTM5A8MXK1 200 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 H3BUI4 141 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 LEFTY2O00292 366 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 KIF3BO15066 747 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 PLSCR1O15162 318 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 B3GALT2O43825 422 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 MARCH6O60337 910 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 TUSC2O75896 110 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 UBXN7O94888 489 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 SCAF4O95104 1147 aaKnown RBP2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 PEX11BO96011 259 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 ANXA1P04083 346 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 ITGB1P05556 798 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 GNAI3P08754 354 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 SBK3P0C264 359 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 SPATA31D3P0C874 917 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 CKBP12277 381 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 GCSHP23434 173 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 PRDX5P30044 214 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 SLC6A4P31645 630 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 RNASE9P60153 205 aaKnown RBP2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 GNAI1P63096 354 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 NKX6-1P78426 367 aaPredicted RBP2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 FGL2Q14314 439 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 FAM102AQ5T9C2 384 aaPredicted RBP2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 AGAP9Q5VTM2 703 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 SPATA31D4Q6ZUB0 917 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 ZNF365Q70YC5 407 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 GDF7Q7Z4P5 450 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 DAAM2Q86T65 1068 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 FAM90A1Q86YD7 464 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 RHOT2Q8IXI1 618 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 PPP1R35Q8TAP8 253 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 CPT1CQ8TCG5 803 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 SH3RF3Q8TEJ3 882 aaPredicted RBP2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 NUP133Q8WUM0 1156 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 SLC35A4Q96G79 324 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 SLC46A2Q9BY10 475 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 TMEM60Q9H2L4 133 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 FAM204AQ9H8W3 233 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 PRDM11Q9NQV5 511 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 PNPOQ9NVS9 261 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 RLIMQ9NVW2 624 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 GEMIN8Q9NWZ8 242 aaKnown RBP2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 OBP2AQ9NY56 170 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 CEP72Q9P209 647 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 CFAP97Q9P2B7 532 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 ATP11BQ9Y2G3 1177 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 CHST2Q9Y4C5 530 aa2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 USP15Q9Y4E8 981 aaPredicted RBP2.83□□□□□ -1.96
PTP4A1-204ENST00000578299 A0A088AWK7 358 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 AHRRA9YTQ3 701 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 FAM227AF5H4B4 570 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 RNASET2O00584 256 aaKnown RBP2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 FAM20BO75063 409 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 PPFIA4O75335 1185 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 SLC6A2P23975 617 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 BUD31P41223 144 aaPredicted RBP2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 PIK3CGP48736 1102 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 AGFG1P52594 562 aaKnown RBP2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 RAB1AP62820 205 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 GPSM2P81274 684 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 GBX1Q14549 363 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 PLS1Q14651 629 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms