RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 TAP1Q03518 808 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 RNASELQ05823 741 aaKnown RBP13.74□□□□□ -0.21
MKS1-206ENST00000577824 UPP1Q16831 310 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 DUOXA2Q1HG44 320 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 FAM114A1Q8IWE2 563 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 AOPEPQ8N6M6 819 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 COLGALT1Q8NBJ5 622 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 OR5B17Q8NGF7 314 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 CACTINQ8WUQ7 758 aaKnown RBP13.74□□□□□ -0.21
MKS1-206ENST00000577824 C18orf25Q96B23 403 aaPredicted RBP13.74□□□□□ -0.21
MKS1-206ENST00000577824 FNBP1Q96RU3 617 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 PLVAPQ9BX97 442 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 MTMR12Q9C0I1 747 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 GOLGA2P5Q9HBQ8 144 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 MSRAQ9UJ68 235 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 COL4A4P53420 1690 aaPredicted RBP13.73□□□□□ -0.21
MKS1-206ENST00000577824 STX10O60499 249 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 ZC3H11AO75152 810 aaKnown RBP eCLIP13.73□□□□□ -0.21
MKS1-206ENST00000577824 GALTP07902 379 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 TMEM191BP0C7N4 346 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 PAX3P23760 479 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 RPL9P32969 192 aaKnown RBP13.73□□□□□ -0.21
MKS1-206ENST00000577824 PPM1AP35813 382 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 SLC11A1P49279 550 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 AARSP49588 968 aaKnown RBP eCLIP13.73□□□□□ -0.21
MKS1-206ENST00000577824 BCAR1P56945 870 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 ERVK-21P61565 698 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 SPAG1Q07617 926 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 ZACNQ401N2 412 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 CCDC40Q4G0X9 1142 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 KCNT2Q6UVM3 1135 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 RNF168Q8IYW5 571 aaPredicted RBP13.73□□□□□ -0.21
MKS1-206ENST00000577824 LRRC52Q8N7C0 313 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 ZNF516Q92618 1163 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 CCDC127Q96BQ5 260 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 DDX27Q96GQ7 796 aaKnown RBP13.73□□□□□ -0.21
MKS1-206ENST00000577824 ANKRD36BP1Q96IX9 119 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 ZNF558Q96NG5 402 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 TGS1Q96RS0 853 aaKnown RBP13.73□□□□□ -0.21
MKS1-206ENST00000577824 TSPY26PQ9H489 355 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 CBX8Q9HC52 389 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 TMEM8AQ9HCN3 771 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 AAASQ9NRG9 546 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 SAMSN1Q9NSI8 373 aaKnown RBP13.73□□□□□ -0.21
MKS1-206ENST00000577824 MARCH5Q9NX47 278 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 SIX4Q9UIU6 781 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 TRIOBPQ9H2D6 2365 aa13.73□□□□□ -0.21
MKS1-206ENST00000577824 CASTOR2A6NHX0 329 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 SMTNL1A8MU46 457 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 PODXLO00592 558 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 PIRO00625 290 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 NRP1O14786 923 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 STAU1O95793 577 aaKnown RBP13.72□□□□□ -0.21
MKS1-206ENST00000577824 TNNC2P02585 160 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 C4BPAP04003 597 aaKnown RBP13.72□□□□□ -0.21
MKS1-206ENST00000577824 TRIM49P0CI25 452 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 TRIM49CP0CI26 452 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 PRKCSHP14314 528 aaPredicted RBP13.72□□□□□ -0.21
MKS1-206ENST00000577824 TNNI1P19237 187 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 BMPR1AP36894 532 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 CLCNKBP51801 687 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 TFAMQ00059 246 aaKnown RBP13.72□□□□□ -0.21
MKS1-206ENST00000577824 PLCB3Q01970 1234 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 PPP3CAQ08209 521 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 TPD52L1Q16890 204 aaPredicted RBP13.72□□□□□ -0.21
MKS1-206ENST00000577824 TCP11X2Q5H9J9 407 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 TDRD10Q5VZ19 366 aaKnown RBP13.72□□□□□ -0.21
MKS1-206ENST00000577824 C9orf57Q5W0N0 161 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 PPP2R2DQ66LE6 453 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 LMBRD2Q68DH5 695 aaPredicted RBP13.72□□□□□ -0.21
MKS1-206ENST00000577824 TRAPPC11Q7Z392 1133 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 SLC39A11Q8N1S5 342 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 C3orf58Q8NDZ4 430 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 TIFAQ96CG3 184 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 FAM193BQ96PV7 902 aaPredicted RBP13.72□□□□□ -0.21
MKS1-206ENST00000577824 POP1Q99575 1024 aaKnown RBP13.72□□□□□ -0.21
MKS1-206ENST00000577824 PAAF1Q9BRP4 392 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 ANP32EQ9BTT0 268 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 NKX2-4Q9H2Z4 354 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 VRTNQ9H8Y1 702 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 FANCLQ9NW38 375 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 DPP3Q9NY33 737 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 STK39Q9UEW8 545 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 COQ4Q9Y3A0 265 aa13.72□□□□□ -0.21
MKS1-206ENST00000577824 TSC2P49815 1807 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 KCNJ18B7U540 433 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 P4HA2O15460 535 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 KIF4AO95239 1232 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 RB1P06400 928 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 PNPLA4P41247 253 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 OR1G1P47890 313 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 ALDH7A1P49419 539 aaKnown RBP13.71□□□□□ -0.21
MKS1-206ENST00000577824 GUCY2FP51841 1108 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 KCNJ12Q14500 433 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 DCAF17Q5H9S7 520 aaPredicted RBP13.71□□□□□ -0.21
MKS1-206ENST00000577824 GPR153Q6NV75 609 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 CD300LGQ6UXG3 332 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 SV2AQ7L0J3 742 aa13.71□□□□□ -0.21
MKS1-206ENST00000577824 TMEM173Q86WV6 379 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms