RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 SLC44A4Q53GD3 710 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 EMC10Q5UCC4 262 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 SLC4A10Q6U841 1118 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 B3GNT9Q6UX72 402 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 HTR3DQ70Z44 454 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 LILRA3Q8N6C8 439 aaPredicted RBP3.18□□□□□ -1.9
COPS3-213ENST00000577210 OR2I1PQ8NGU4 316 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 ATXN2LQ8WWM7 1075 aaKnown RBP3.18□□□□□ -1.9
COPS3-213ENST00000577210 DVL3Q92997 716 aaPredicted RBP3.18□□□□□ -1.9
COPS3-213ENST00000577210 SLC35A4Q96G79 324 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 MED15Q96RN5 788 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 CGRRF1Q99675 332 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 ACO2Q99798 780 aaKnown RBP3.18□□□□□ -1.9
COPS3-213ENST00000577210 SSBP3Q9BWW4 388 aaPredicted RBP3.18□□□□□ -1.9
COPS3-213ENST00000577210 GPR87Q9BY21 358 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 AGO3Q9H9G7 860 aaKnown RBP3.18□□□□□ -1.9
COPS3-213ENST00000577210 SPON1Q9HCB6 807 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 PARPBPQ9NWS1 579 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 SMPD4Q9NXE4 827 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 JKAMPQ9P055 326 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 ABCF2Q9UG63 623 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 FRMPD2Q68DX3 1309 aaPredicted RBP3.18□□□□□ -1.9
COPS3-213ENST00000577210 ZMYM3Q14202 1370 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 A0A1W2PPL8 197 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 ISM1B1AKI9 464 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 SOAT2O75908 522 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 AMY1AP04745 511 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 CD1AP06126 327 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 XRCC6P12956 609 aaKnown RBP eCLIP3.17□□□□□ -1.9
COPS3-213ENST00000577210 ACRV1P26436 265 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 GNALP38405 381 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 ALDH1A3P47895 512 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 MAP2K6P52564 334 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 EFEMP1Q12805 493 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 PICALMQ13492 652 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 ZNF267Q14586 743 aaPredicted RBP3.17□□□□□ -1.9
COPS3-213ENST00000577210 SPDYE7PQ495Y7 208 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 FLYWCH1Q4VC44 716 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 AMOTQ4VCS5 1084 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 MFSD14BQ5SR56 506 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 ZNF529Q6P280 563 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 FOXR2Q6PJQ5 311 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 ZNF365Q70YC5 407 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 MAEAQ7L5Y9 396 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 LIMS2Q7Z4I7 341 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 C14orf80Q86SX3 495 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 ZBTB34Q8NCN2 500 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 OR10H5Q8NGA6 315 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 OR52N2Q8NGI0 321 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 Q8TCH9 128 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 NUP133Q8WUM0 1156 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 KAT5Q92993 513 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 ADOQ96SZ5 270 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 LRRC27Q9C0I9 530 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 ZNF700Q9H0M5 742 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 NUP62CLQ9H1M0 184 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 RNPEPQ9H4A4 650 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 BRD9Q9H8M2 597 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 ANLNQ9NQW6 1124 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 ATP11BQ9Y2G3 1177 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 SH3BP1Q9Y3L3 701 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 NR2E3Q9Y5X4 410 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 ACTL7AQ9Y615 435 aa3.17□□□□□ -1.9
COPS3-213ENST00000577210 ANO9A1A5B4 782 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 KIAA0391O15091 583 aaKnown RBP3.16□□□□□ -1.9
COPS3-213ENST00000577210 GRM6O15303 877 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 SLC43A1O75387 559 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 ALDH2P05091 517 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 ADRB1P08588 477 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 CKBP12277 381 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 TRIM27P14373 513 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 PCSK1P29120 753 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 PRDX5P30044 214 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 MAGEA10P43363 369 aaPredicted RBP3.16□□□□□ -1.9
COPS3-213ENST00000577210 RAB1AP62820 205 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 NKX6-1P78426 367 aaPredicted RBP3.16□□□□□ -1.9
COPS3-213ENST00000577210 SNAPC2Q13487 334 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 ACAP1Q15027 740 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 POLD3Q15054 466 aaPredicted RBP3.16□□□□□ -1.9
COPS3-213ENST00000577210 SAFBQ15424 915 aaKnown RBP eCLIP3.16□□□□□ -1.9
COPS3-213ENST00000577210 NPNTQ6UXI9 565 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 CCDC149Q6ZUS6 474 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 RHOT2Q8IXI1 618 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 ELOA2Q8IYF1 753 aaPredicted RBP3.16□□□□□ -1.9
COPS3-213ENST00000577210 KIAA0319LQ8IZA0 1049 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 REPS2Q8NFH8 660 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 KBTBD7Q8WVZ9 684 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 IPCEF1Q8WWN9 437 aaPredicted RBP3.16□□□□□ -1.9
COPS3-213ENST00000577210 SCAMP4Q969E2 229 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 CEP95Q96GE4 821 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 ZC3H10Q96K80 434 aaKnown RBP3.16□□□□□ -1.9
COPS3-213ENST00000577210 PNKPQ96T60 521 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 MNTQ99583 582 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 VRK1Q99986 396 aaPredicted RBP3.16□□□□□ -1.9
COPS3-213ENST00000577210 NDC1Q9BTX1 674 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 SARGQ9BW04 601 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 C1QTNF3Q9BXJ4 246 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 SLC46A2Q9BY10 475 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 BTBD1Q9H0C5 482 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 KCNH6Q9H252 994 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms