RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 FLYWCH1Q4VC44 716 aa6.87□□□□□ -1.31
NUP88-213ENST00000576862 TSHZ3Q63HK5 1081 aa6.87□□□□□ -1.31
NUP88-213ENST00000576862 IL17RDQ8NFM7 739 aa6.87□□□□□ -1.31
NUP88-213ENST00000576862 OR56A1Q8NGH5 318 aa6.87□□□□□ -1.31
NUP88-213ENST00000576862 ZNF483Q8TF39 744 aaPredicted RBP6.87□□□□□ -1.31
NUP88-213ENST00000576862 MVB12AQ96EY5 273 aa6.87□□□□□ -1.31
NUP88-213ENST00000576862 FAM193BQ96PV7 902 aaPredicted RBP6.87□□□□□ -1.31
NUP88-213ENST00000576862 MMRN2Q9H8L6 949 aa6.87□□□□□ -1.31
NUP88-213ENST00000576862 AKIP1Q9NQ31 210 aa6.87□□□□□ -1.31
NUP88-213ENST00000576862 DKK2Q9UBU2 259 aa6.87□□□□□ -1.31
NUP88-213ENST00000576862 EID1Q9Y6B2 187 aa6.87□□□□□ -1.31
NUP88-213ENST00000576862 MARCH11A6NNE9 402 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 ZNF202O95125 648 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 MAP2K6P52564 334 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 NOMO3P69849 1222 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 NOGQ13253 232 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 ATP2B3Q16720 1220 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 BEAN1Q3B7T3 259 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 NOMO2Q5JPE7 1267 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 B3GNT9Q6UX72 402 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 MRGPREQ86SM8 312 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 C3orf20Q8ND61 904 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 LENG9Q96B70 501 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 NRDE2Q9H7Z3 1164 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 G3BP2Q9UN86 482 aaKnown RBP6.86□□□□□ -1.31
NUP88-213ENST00000576862 FZD1Q9UP38 647 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 ATP11BQ9Y2G3 1177 aa6.86□□□□□ -1.31
NUP88-213ENST00000576862 GAGE12BA1L429 117 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 GAGE12HA6NDE8 117 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 F2RL2O00254 374 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 RNASET2O00584 256 aaKnown RBP6.85□□□□□ -1.31
NUP88-213ENST00000576862 PRPF3O43395 683 aaKnown RBP6.85□□□□□ -1.31
NUP88-213ENST00000576862 SLC43A1O75387 559 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 HAUS5O94927 633 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 SCGB1D2O95969 90 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 MTHFD1P11586 935 aaKnown RBP6.85□□□□□ -1.31
NUP88-213ENST00000576862 CKBP12277 381 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 LPOP22079 712 aaPredicted RBP6.85□□□□□ -1.31
NUP88-213ENST00000576862 CYP2C19P33261 490 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 ACVRL1P37023 503 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 HK3P52790 923 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 SLFN5Q08AF3 891 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 IFIT1BQ5T764 474 aaKnown RBP6.85□□□□□ -1.31
NUP88-213ENST00000576862 SLC4A10Q6U841 1118 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 EPM2AIP1Q7L775 607 aaPredicted RBP6.85□□□□□ -1.31
NUP88-213ENST00000576862 FITM2Q8N6M3 262 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 NLGN4YQ8NFZ3 816 aaPredicted RBP6.85□□□□□ -1.31
NUP88-213ENST00000576862 RGMAQ96B86 450 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 MYEOVQ96EZ4 313 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 AIFM3Q96NN9 605 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 ZSWIM1Q9BR11 485 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 ANLNQ9NQW6 1124 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 POLHQ9Y253 713 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 REXO2Q9Y3B8 237 aaKnown RBP6.85□□□□□ -1.31
NUP88-213ENST00000576862 PCDHA3Q9Y5H8 950 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 HS3ST4Q9Y661 456 aa6.85□□□□□ -1.31
NUP88-213ENST00000576862 A0A1B0GTW7 788 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 PPM1GO15355 546 aaPredicted RBP6.84□□□□□ -1.31
NUP88-213ENST00000576862 SLC16A6O15403 523 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 FZD7O75084 574 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 FTLP02792 175 aaPredicted RBP6.84□□□□□ -1.31
NUP88-213ENST00000576862 CFIP05156 583 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 SPATA31D3P0C874 917 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 PTGS2P35354 604 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 OCA2Q04671 838 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 B3GNTL1Q67FW5 361 aaPredicted RBP6.84□□□□□ -1.31
NUP88-213ENST00000576862 SPATA31D4Q6ZUB0 917 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 GRAMD1CQ8IYS0 662 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 TBC1D15Q8TC07 691 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 DIS3LQ8TF46 1054 aaKnown RBP6.84□□□□□ -1.31
NUP88-213ENST00000576862 HAS1Q92839 578 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 CLIP3Q96DZ5 547 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 MARS2Q96GW9 593 aaKnown RBP6.84□□□□□ -1.31
NUP88-213ENST00000576862 MAP3K14Q99558 947 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 MLST8Q9BVC4 326 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 SCAND2PQ9GZW5 306 aaPredicted RBP6.84□□□□□ -1.31
NUP88-213ENST00000576862 JKAMPQ9P055 326 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 SLC45A2Q9UMX9 530 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 MAP3K2Q9Y2U5 619 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 HS3ST3A1Q9Y663 406 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 FPGT-TNNI3KV9GXZ4 949 aa6.84□□□□□ -1.31
NUP88-213ENST00000576862 AATKQ6ZMQ8 1374 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 CENPVL1A0A0U1RR11 272 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 TMEM200CA6NKL6 621 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 AP1G1O43747 822 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 LPXNO60711 386 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 OFD1O75665 1012 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 NDUFA10O95299 355 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 ALDH2P05091 517 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 LAG3P18627 525 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 FGFR4P22455 802 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 PPP2R5AQ15172 486 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 UTP14CQ5TAP6 766 aaKnown RBP6.83□□□□□ -1.32
NUP88-213ENST00000576862 THEMIS2Q5TEJ8 643 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 ZNF365Q70YC5 407 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 HEATR3Q7Z4Q2 680 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 FAM90A1Q86YD7 464 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 MAPKAPK5Q8IW41 473 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 NUP133Q8WUM0 1156 aa6.83□□□□□ -1.32
NUP88-213ENST00000576862 LRGUKQ96M69 825 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms