RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 XXYLT1Q8NBI6 393 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 BEST2Q8NFU1 509 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 NOC3LQ8WTT2 800 aaKnown RBP11.97□□□□□ -0.49
CHD3-216ENST00000573936 TMEM174Q8WUU8 243 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 SAAL1Q96ER3 474 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 ZMAT2Q96NC0 199 aaKnown RBP11.97□□□□□ -0.49
CHD3-216ENST00000573936 CXCL16Q9H2A7 254 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 KCTD10Q9H3F6 313 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 NSUN3Q9H649 340 aaKnown RBP11.97□□□□□ -0.49
CHD3-216ENST00000573936 ENTPD7Q9NQZ7 604 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 RBAKQ9NYW8 714 aaPredicted RBP11.97□□□□□ -0.49
CHD3-216ENST00000573936 ADAM28Q9UKQ2 775 aa11.97□□□□□ -0.49
CHD3-216ENST00000573936 FSD2A1L4K1 749 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 GOLGA8IPA6NC78 632 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 GOLGA8JA6NMD2 632 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 FSCN2O14926 492 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 DCXO43602 365 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 TRAPPC3O43617 180 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 NCK2O43639 380 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 B4GALT3O60512 393 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 CSPG5O95196 566 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 SOD2P04179 222 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 PAX3P23760 479 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 DNAJB1P25685 340 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 RPL13P26373 211 aaKnown RBP11.96□□□□□ -0.49
CHD3-216ENST00000573936 LRPAP1P30533 357 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 SMC1AQ14683 1233 aaKnown RBP11.96□□□□□ -0.49
CHD3-216ENST00000573936 TMEM132DQ14C87 1099 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 ZBTB6Q15916 424 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 NFIL3Q16649 462 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 TCEAL5Q5H9L2 206 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 JADE1Q6IE81 842 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 VPS52Q8N1B4 723 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 CACTINQ8WUQ7 758 aaKnown RBP11.96□□□□□ -0.49
CHD3-216ENST00000573936 FBXL18Q96ME1 805 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 TCF25Q9BQ70 676 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 HERC2P3Q9BVR0 1158 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 KCNH6Q9H252 994 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 MARCH5Q9NX47 278 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 KIAA1468Q9P260 1216 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 TRAF3IP3Q9Y228 551 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 C2CD2Q9Y426 696 aa11.96□□□□□ -0.49
CHD3-216ENST00000573936 SF3B1O75533 1304 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHD3-216ENST00000573936 PODXLO00592 558 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 MEFVO15553 781 aaPredicted RBP11.95□□□□□ -0.5
CHD3-216ENST00000573936 EXOC3O60645 756 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 B3GAT3O94766 335 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 CXCL14O95715 111 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 CTSAP10619 480 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 CYP2J2P51589 502 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 CLCNKBP51801 687 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 ERVFC1P60507 584 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 CAMK1Q14012 370 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 UPP1Q16831 310 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 SPATA1Q5VX52 437 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 FUT10Q6P4F1 479 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 TMEM173Q86WV6 379 aaPredicted RBP11.95□□□□□ -0.5
CHD3-216ENST00000573936 GPR65Q8IYL9 337 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 TRIML1Q8N9V2 468 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 BCL7CQ8WUZ0 217 aaPredicted RBP11.95□□□□□ -0.5
CHD3-216ENST00000573936 ERCC4Q92889 916 aaPredicted RBP11.95□□□□□ -0.5
CHD3-216ENST00000573936 C18orf25Q96B23 403 aaPredicted RBP11.95□□□□□ -0.5
CHD3-216ENST00000573936 CDCA3Q99618 268 aaPredicted RBP11.95□□□□□ -0.5
CHD3-216ENST00000573936 TSG101Q99816 390 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 ZBP1Q9H171 429 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 CLSTN2Q9H4D0 955 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 DMAC2Q9NW81 257 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 PRKAG3Q9UGI9 489 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 MAN1B1Q9UKM7 699 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 MAPK8IP1Q9UQF2 711 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 KIAA1671Q9BY89 1806 aa11.95□□□□□ -0.5
CHD3-216ENST00000573936 TDRD15B5MCY1 1934 aaKnown RBP11.94□□□□□ -0.5
CHD3-216ENST00000573936 TULP1O00294 542 aaPredicted RBP11.94□□□□□ -0.5
CHD3-216ENST00000573936 KIF4AO95239 1232 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 MBD3O95983 291 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 NR3C1P04150 777 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 URODP06132 367 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 CA8P35219 290 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 IRS1P35568 1242 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 PRCPP42785 496 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 SOX4Q06945 474 aaPredicted RBP11.94□□□□□ -0.5
CHD3-216ENST00000573936 SPAG1Q07617 926 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 SNRNP35Q16560 246 aaKnown RBP11.94□□□□□ -0.5
CHD3-216ENST00000573936 CAMK4Q16566 473 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 EDRF1Q3B7T1 1238 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 USP41Q3LFD5 358 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 PLPP4Q5VZY2 271 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 KIAA1841Q6NSI8 718 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 PDXDC1Q6P996 788 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 RNF168Q8IYW5 571 aaPredicted RBP11.94□□□□□ -0.5
CHD3-216ENST00000573936 MRPL43Q8N983 215 aaKnown RBP11.94□□□□□ -0.5
CHD3-216ENST00000573936 RDH13Q8NBN7 331 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 ZSWIM2Q8NEG5 633 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 DHTKD1Q96HY7 919 aaPredicted RBP11.94□□□□□ -0.5
CHD3-216ENST00000573936 ANKRD36BP1Q96IX9 119 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 MFSD14AQ96MC6 490 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 FNBP1Q96RU3 617 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 PAAF1Q9BRP4 392 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 NUP62CLQ9H1M0 184 aa11.94□□□□□ -0.5
CHD3-216ENST00000573936 GOLGA2P5Q9HBQ8 144 aa11.94□□□□□ -0.5
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