RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 ZNF747Q9BV97 191 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 KIAA1683Q9H0B3 1180 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 RMI1Q9H9A7 625 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 MSL2Q9HCI7 577 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 KLHL42Q9P2K6 505 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 SLC30A1Q9Y6M5 507 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 KDRP35968 1356 aa4.39□□□□□ -1.71
CDC27-211ENST00000570740 COL16A1Q07092 1604 aaPredicted RBP4.39□□□□□ -1.71
CDC27-211ENST00000570740 RALGAPBQ86X10 1494 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 TULP4Q9NRJ4 1543 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 SHTN1A0MZ66 631 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 B4E1Z4 1266 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 EXOC5O00471 708 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 NPHP1O15259 732 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 CREB3O43889 395 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 CEP104O60308 925 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 CDC14BO60729 498 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 E2F6O75461 281 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 PARNO95453 639 aaKnown RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 ADCY5O95622 1261 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 MAP4K4O95819 1239 aaPredicted RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 EZRP15311 586 aaKnown RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 COMTP21964 271 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 RBM5P52756 815 aaKnown RBP eCLIP4.38□□□□□ -1.71
CDC27-211ENST00000570740 RBM6P78332 1123 aaKnown RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 IRF9Q00978 393 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 ALDH6A1Q02252 535 aaKnown RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 TMEM132BQ14DG7 1078 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 TPD52L1Q16890 204 aaPredicted RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 ARHGAP44Q17R89 818 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 RNF187Q5TA31 235 aaPredicted RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 Q6ZSN1 163 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 POLNQ7Z5Q5 900 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 RTN4RL1Q86UN2 441 aaPredicted RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 ANKRD13BQ86YJ7 626 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 MYOCDQ8IZQ8 938 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 Q8N1X5 172 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 NME8Q8N427 588 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 SLC16A11Q8NCK7 471 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 CALML6Q8TD86 181 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 MAGEC3Q8TD91 643 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 SMCR8Q8TEV9 937 aaPredicted RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 FOXRED1Q96CU9 486 aaPredicted RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 CABS1Q96KC9 395 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 OSBPL9Q96SU4 736 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 ADOQ96SZ5 270 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 DPYSL5Q9BPU6 564 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 BOCQ9BWV1 1114 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 OR10A2Q9H208 303 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 VPS11Q9H270 941 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 UNC45AQ9H3U1 944 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 ZSCAN16Q9H4T2 348 aaPredicted RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 TRPV5Q9NQA5 729 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 LMBRD1Q9NUN5 540 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 SWAP70Q9UH65 585 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 PUF60Q9UHX1 559 aaKnown RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 BLOC1S6Q9UL45 172 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 ODF2LQ9ULJ1 636 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 THRAP3Q9Y2W1 955 aaKnown RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 CTDP1Q9Y5B0 961 aaPredicted RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 PTPRCP08575 1304 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 SOS1Q07889 1333 aaPredicted RBP4.38□□□□□ -1.71
CDC27-211ENST00000570740 EVC2Q86UK5 1308 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 SBNO1A3KN83 1393 aa4.38□□□□□ -1.71
CDC27-211ENST00000570740 COL22A1Q8NFW1 1626 aaPredicted RBP4.37□□□□□ -1.71
CDC27-211ENST00000570740 M0R2C6 588 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 PDLIM1O00151 329 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 AHCYL1O43865 530 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 PPFIA4O75335 1185 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 RTN3O95197 1032 aaPredicted RBP4.37□□□□□ -1.71
CDC27-211ENST00000570740 CAVIN2O95810 425 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 FSHBP01225 129 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 ASLP04424 464 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 H2AFXP16104 143 aaPredicted RBP4.37□□□□□ -1.71
CDC27-211ENST00000570740 PAX3P23760 479 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 APEX1P27695 318 aaKnown RBP4.37□□□□□ -1.71
CDC27-211ENST00000570740 HNRNPH1P31943 449 aaKnown RBP4.37□□□□□ -1.71
CDC27-211ENST00000570740 GCKP35557 465 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 IGFALSP35858 605 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 RPS19P39019 145 aaKnown RBP4.37□□□□□ -1.71
CDC27-211ENST00000570740 FNTBP49356 437 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 MEOX1P50221 254 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 SH3BGRP55822 239 aaPredicted RBP4.37□□□□□ -1.71
CDC27-211ENST00000570740 IQCB1Q15051 598 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 PTPN14Q15678 1187 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 CCDC57Q2TAC2 916 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 SLC4A8Q2Y0W8 1093 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 CCDC144BQ3MJ40 725 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 PREPLQ4J6C6 727 aaPredicted RBP4.37□□□□□ -1.71
CDC27-211ENST00000570740 LRRC23Q53EV4 343 aaPredicted RBP4.37□□□□□ -1.71
CDC27-211ENST00000570740 TTC19Q6DKK2 380 aaPredicted RBP4.37□□□□□ -1.71
CDC27-211ENST00000570740 ZCCHC8Q6NZY4 707 aaKnown RBP4.37□□□□□ -1.71
CDC27-211ENST00000570740 DDX53Q86TM3 631 aaKnown RBP4.37□□□□□ -1.71
CDC27-211ENST00000570740 MYLK4Q86YV6 388 aaPredicted RBP4.37□□□□□ -1.71
CDC27-211ENST00000570740 MFN1Q8IWA4 741 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 IQCF2Q8IXL9 164 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 RNF168Q8IYW5 571 aaPredicted RBP4.37□□□□□ -1.71
CDC27-211ENST00000570740 RTKN2Q8IZC4 609 aa4.37□□□□□ -1.71
CDC27-211ENST00000570740 BCL6BQ8N143 479 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms