RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	P4HA2	O15460	535 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	TRIM49	P0CI25	452 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	TRIM49C	P0CI26	452 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	CDK11B	P21127	795 aa	Known RBP	12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	SMAD3	P84022	425 aa	Known RBP	12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	CETN1	Q12798	172 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	BIRC3	Q13489	604 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	KRT39	Q6A163	491 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	LUZP1	Q86V48	1076 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	COLGALT2	Q8IYK4	626 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	ZNF560	Q96MR9	790 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	SAMD11	Q96NU1	681 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	TMEM8A	Q9HCN3	771 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	MIOS	Q9NXC5	875 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	DPP3	Q9NY33	737 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	TUBGCP4	Q9UGJ1	667 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	MSRA	Q9UJ68	235 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	MRPL42	Q9Y6G3	142 aa	Known RBP	12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	KIAA1671	Q9BY89	1806 aa		12.97	□□□□□ -0.33
FANCA-231	ENST00000568626	PTPRJ	Q12913	1337 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	TMEM189-UBE2V1	I3L0A0	370 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	TULP1	O00294	542 aa	Predicted RBP	12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	PMM2	O15305	246 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	AFP	P02771	609 aa	Known RBP	12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	PPM1A	P35813	382 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	PNPLA4	P41247	253 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	DLG4	P78352	724 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	LRIT3	Q3SXY7	679 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	ZACN	Q401N2	412 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	C1orf220	Q5T0J3	134 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	SPOUT1	Q5T280	376 aa	Known RBP	12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	C15orf39	Q6ZRI6	1047 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	TRAPPC11	Q7Z392	1133 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	CREBRF	Q8IUR6	639 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	LRRC52	Q8N7C0	313 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	OR5B17	Q8NGF7	314 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	CLP1	Q92989	425 aa	Known RBP	12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	C18orf25	Q96B23	403 aa	Predicted RBP	12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	ZNF558	Q96NG5	402 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	POP1	Q99575	1024 aa	Known RBP	12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	TUBGCP2	Q9BSJ2	902 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	CXCL16	Q9H2A7	254 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	HSD3B7	Q9H2F3	369 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	CWH43	Q9H720	699 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	NRDE2	Q9H7Z3	1164 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	STK39	Q9UEW8	545 aa		12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	LIMA1	Q9UHB6	759 aa	Known RBP	12.96	□□□□□ -0.33
FANCA-231	ENST00000568626	GTPBP10	A4D1E9	387 aa	Known RBP	12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	CASTOR2	A6NHX0	329 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	PODXL	O00592	558 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	PHACTR2	O75167	634 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	DDHD2	O94830	711 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	C4BPA	P04003	597 aa	Known RBP	12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	ITGB3	P05106	788 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	GCLM	P48507	274 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	FMO5	P49326	533 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	ALDH7A1	P49419	539 aa	Known RBP	12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	RABGGTB	P53611	331 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	RBP5	P82980	135 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	MYL7	Q01449	175 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	SOX4	Q06945	474 aa	Predicted RBP	12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	PPP3CA	Q08209	521 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	KCNH2	Q12809	1159 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	TRPC3	Q13507	836 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	KRT31	Q15323	416 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	UPP1	Q16831	310 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	VWA3B	Q502W6	1294 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	HSP90AA4P	Q58FG1	418 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	TDRD10	Q5VZ19	366 aa	Known RBP	12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	C9orf57	Q5W0N0	161 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	LMBRD2	Q68DH5	695 aa	Predicted RBP	12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	FAM109B	Q6ICB4	259 aa	Predicted RBP	12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	SV2A	Q7L0J3	742 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	ZNF280B	Q86YH2	543 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	C1orf127	Q8N9H9	656 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	CCDC150	Q8NCX0	1101 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	RNF214	Q8ND24	703 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	COLEC11	Q9BWP8	271 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	PLVAP	Q9BX97	442 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	PBX4	Q9BYU1	374 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	IMPG2	Q9BZV3	1241 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	PCDHB12	Q9Y5F1	795 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	NLRC5	Q86WI3	1866 aa		12.95	□□□□□ -0.34
FANCA-231	ENST00000568626	ANO9	A1A5B4	782 aa		12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	ARHGEF37	A1IGU5	675 aa		12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	LCHN	A4D1U4	455 aa		12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	LINC01553	A4QN01	128 aa		12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	LRRC10B	A6NIK2	292 aa		12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	GRXCR1	A8MXD5	290 aa		12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	PIR	O00625	290 aa		12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	B4GALT3	O60512	393 aa		12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	STAU1	O95793	577 aa	Known RBP	12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	ALDH2	P05091	517 aa		12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	CA3	P07451	260 aa		12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	GALT	P07902	379 aa		12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	KRT19	P08727	400 aa		12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	POLR2B	P30876	1174 aa	Known RBP	12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	ATIC	P31939	592 aa		12.94	□□□□□ -0.34
FANCA-231	ENST00000568626	PIK3CA	P42336	1068 aa		12.94	□□□□□ -0.34

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