RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 PDCD11Q14690 1871 aaKnown RBP13.5□□□□□ -0.25
KARS-204ENST00000564578 C5orf67F2Z3F1 127 aa13.5□□□□□ -0.25
KARS-204ENST00000564578 ITGB1P05556 798 aa13.5□□□□□ -0.25
KARS-204ENST00000564578 LAG3P18627 525 aa13.5□□□□□ -0.25
KARS-204ENST00000564578 CYP3A5P20815 502 aa13.5□□□□□ -0.25
KARS-204ENST00000564578 VAMP7P51809 220 aa13.5□□□□□ -0.25
KARS-204ENST00000564578 MARSP56192 900 aaKnown RBP13.5□□□□□ -0.25
KARS-204ENST00000564578 TFAMQ00059 246 aaKnown RBP13.5□□□□□ -0.25
KARS-204ENST00000564578 HSP90AA2PQ14568 343 aaPredicted RBP13.5□□□□□ -0.25
KARS-204ENST00000564578 NCAPHQ15003 741 aa13.5□□□□□ -0.25
KARS-204ENST00000564578 SPOUT1Q5T280 376 aaKnown RBP13.5□□□□□ -0.25
KARS-204ENST00000564578 INTS8Q75QN2 995 aaKnown RBP13.5□□□□□ -0.25
KARS-204ENST00000564578 NT5DC4Q86YG4 428 aa13.5□□□□□ -0.25
KARS-204ENST00000564578 WDR49Q8IV35 697 aa13.5□□□□□ -0.25
KARS-204ENST00000564578 C1orf127Q8N9H9 656 aa13.5□□□□□ -0.25
KARS-204ENST00000564578 FAM193BQ96PV7 902 aaPredicted RBP13.5□□□□□ -0.25
KARS-204ENST00000564578 TMEM175Q9BSA9 504 aa13.5□□□□□ -0.25
KARS-204ENST00000564578 MTMR12Q9C0I1 747 aa13.5□□□□□ -0.25
KARS-204ENST00000564578 SAMSN1Q9NSI8 373 aaKnown RBP13.5□□□□□ -0.25
KARS-204ENST00000564578 MARCH5Q9NX47 278 aa13.5□□□□□ -0.25
KARS-204ENST00000564578 NFE2L3Q9Y4A8 694 aa13.5□□□□□ -0.25
KARS-204ENST00000564578 EPOPA6NHQ4 379 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 PPEF2O14830 753 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 EPB41P11171 864 aaKnown RBP13.49□□□□□ -0.25
KARS-204ENST00000564578 LRPAP1P30533 357 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 OR1G1P47890 313 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 PPP3CAQ08209 521 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 SURF1Q15526 300 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 FRMD5Q7Z6J6 570 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 SLC39A11Q8N1S5 342 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 ZNF558Q96NG5 402 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 FNBP1Q96RU3 617 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 CGRRF1Q99675 332 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 HSD3B7Q9H2F3 369 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 ZNF576Q9H609 170 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 DPP3Q9NY33 737 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 SIX4Q9UIU6 781 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 FAN1Q9Y2M0 1017 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 PRG3Q9Y2Y8 225 aaPredicted RBP13.49□□□□□ -0.25
KARS-204ENST00000564578 KIAA1671Q9BY89 1806 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 ANO9A1A5B4 782 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 IKBKBO14920 756 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 KIF4AO95239 1232 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 EFEMP2O95967 443 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 TRIM49P0CI25 452 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 TRIM49CP0CI26 452 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 TNNI1P19237 187 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 CTNNB1P35222 781 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 ENPEPQ07075 957 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 DUOXA2Q1HG44 320 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 C15orf39Q6ZRI6 1047 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 KLHL23Q8NBE8 558 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 SLC35C1Q96A29 364 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 IGSF21Q96ID5 467 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 BPIFA3Q9BQP9 254 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 VN1R3Q9BXE9 311 aa13.49□□□□□ -0.25
KARS-204ENST00000564578 ARMCX3Q9UH62 379 aaPredicted RBP13.49□□□□□ -0.25
KARS-204ENST00000564578 MYO7AQ13402 2215 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 PIRO00625 290 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 FGF18O76093 207 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 B3GAT3O94766 335 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 CST3P01034 146 aaPredicted RBP13.48□□□□□ -0.25
KARS-204ENST00000564578 C4BPAP04003 597 aaKnown RBP13.48□□□□□ -0.25
KARS-204ENST00000564578 RPL9P32969 192 aaKnown RBP13.48□□□□□ -0.25
KARS-204ENST00000564578 ZNF165P49910 485 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 MYL5Q02045 173 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 HSP90AA4PQ58FG1 418 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 C9orf57Q5W0N0 161 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 TRAPPC11Q7Z392 1133 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 TRIM59Q8IWR1 403 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 DHX40Q8IX18 779 aaKnown RBP13.48□□□□□ -0.25
KARS-204ENST00000564578 BEST2Q8NFU1 509 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 ARNTL2Q8WYA1 636 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 UROC1Q96N76 676 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 PLVAPQ9BX97 442 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 THAP9Q9H5L6 903 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 AAASQ9NRG9 546 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 FANCLQ9NW38 375 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 RWDD3Q9Y3V2 267 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 PCDHB12Q9Y5F1 795 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 PRUNE2Q8WUY3 3088 aa13.48□□□□□ -0.25
KARS-204ENST00000564578 TMEM189-UBE2V1I3L0A0 370 aa13.47□□□□□ -0.25
KARS-204ENST00000564578 PODXLO00592 558 aa13.47□□□□□ -0.25
KARS-204ENST00000564578 XPOTO43592 962 aaKnown RBP13.47□□□□□ -0.25
KARS-204ENST00000564578 GNA14O95837 355 aa13.47□□□□□ -0.25
KARS-204ENST00000564578 ITGB3P05106 788 aa13.47□□□□□ -0.25
KARS-204ENST00000564578 RB1P06400 928 aa13.47□□□□□ -0.25
KARS-204ENST00000564578 KRT13P13646 458 aa13.47□□□□□ -0.25
KARS-204ENST00000564578 CAMK1Q14012 370 aa13.47□□□□□ -0.25
KARS-204ENST00000564578 IQCB1Q15051 598 aa13.47□□□□□ -0.25
KARS-204ENST00000564578 ZACNQ401N2 412 aa13.47□□□□□ -0.25
KARS-204ENST00000564578 CDKAL1Q5VV42 579 aa13.47□□□□□ -0.25
KARS-204ENST00000564578 TDRD10Q5VZ19 366 aaKnown RBP13.47□□□□□ -0.25
KARS-204ENST00000564578 DCLRE1AQ6PJP8 1040 aa13.47□□□□□ -0.25
KARS-204ENST00000564578 SV2AQ7L0J3 742 aa13.47□□□□□ -0.25
KARS-204ENST00000564578 HASPINQ8TF76 798 aa13.47□□□□□ -0.25
KARS-204ENST00000564578 CACTINQ8WUQ7 758 aaKnown RBP13.47□□□□□ -0.25
KARS-204ENST00000564578 DDX27Q96GQ7 796 aaKnown RBP13.47□□□□□ -0.25
KARS-204ENST00000564578 CNOT6LQ96LI5 555 aaKnown RBP13.47□□□□□ -0.25
KARS-204ENST00000564578 SAMD11Q96NU1 681 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms