RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 HNRNPCP07910 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 RARGP13631 454 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 DRG2P55039 364 aaKnown RBP14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 ZNF211Q13398 564 aaPredicted RBP14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 MAP7Q14244 749 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 TMEM119Q4V9L6 283 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 ACSBG2Q5FVE4 666 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 NIM1KQ8IY84 436 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 LZICQ8WZA0 190 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 ABTB1Q969K4 478 aaPredicted RBP14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 C18orf8Q96DM3 657 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 NR1H4Q96RI1 486 aaPredicted RBP14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 MIS12Q9H081 205 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 ASCC2Q9H1I8 757 aaPredicted RBP14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 BCAS3Q9H6U6 928 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 HERC5Q9UII4 1024 aaKnown RBP14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 AMFRQ9UKV5 643 aa14.91□□□□□ -0.02
GTF3C1-203ENST00000562609 WNT10BO00744 389 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 PTPN4P29074 926 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 LRRC63Q05C16 580 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 DHX34Q14147 1143 aaKnown RBP14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 TNIP1Q15025 636 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 SPDYE2Q495Y8 402 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 COBLL1Q53SF7 1204 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 DCAF12L1Q5VU92 463 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 NELFCDQ8IXH7 590 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 SYCE1Q8N0S2 351 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 AGBL1Q96MI9 1066 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 NKIRAS1Q9NYS0 192 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 TTC7AQ9ULT0 858 aaPredicted RBP14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 ZNRF3Q9ULT6 936 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 C10orf71Q711Q0 1435 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 DCTN3O75935 186 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 CDK7P50613 346 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 CDR2Q01850 454 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 ARHGEF18Q6ZSZ5 1173 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 SPATA24Q86W54 205 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 DNAJC19Q96DA6 116 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 CLMNQ96JQ2 1002 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 MIPEPQ99797 713 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 KRT82Q9NSB4 513 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 CIDEBQ9UHD4 219 aa14.9□□□□□ -0.02
GTF3C1-203ENST00000562609 TMEM221A6NGB7 291 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 PSMG1O95456 288 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 FUT4P22083 530 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 ATP5DP30049 168 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 ZNF76P36508 570 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 PPP2R5EQ16537 467 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 TCERG1LQ5VWI1 586 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 CATSPER3Q86XQ3 398 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 RIBC1Q8N443 379 aaPredicted RBP14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 LENG9Q96B70 501 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 TRAFD1O14545 582 aaPredicted RBP14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 PLA2G4BP0C869 781 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 STRN3Q13033 797 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 COASYQ13057 564 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 DNAJC3Q13217 504 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 TAF1BQ53T94 588 aaPredicted RBP14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 GPBP1Q86WP2 473 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 GUF1Q8N442 669 aaKnown RBP14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 NAT14Q8WUY8 206 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 SNRNP27Q8WVK2 155 aaKnown RBP14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 SERPINB12Q96P63 405 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 TLE6Q9H808 572 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 TMX2Q9Y320 296 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 COL4A3BPQ9Y5P4 624 aa14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 ASTN2O75129 1339 aaPredicted RBP14.89□□□□□ -0.03
GTF3C1-203ENST00000562609 DDX3XO00571 662 aaKnown RBP eCLIP14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 CHMP2AO43633 222 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 SUPT3HO75486 399 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 GFPT2O94808 682 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 H2AFZP0C0S5 128 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 SH3BGRP55822 239 aaPredicted RBP14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 RASA3Q14644 834 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 H2AFVQ71UI9 128 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 MARK2Q7KZI7 788 aaKnown RBP14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 IRF2BP2Q7Z5L9 587 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 ZBTB8BQ8NAP8 495 aaPredicted RBP14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 ETNPPLQ8TBG4 499 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 CRYGNQ8WXF5 182 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 STMN2Q93045 179 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 MPP4Q96JB8 637 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 RUNDC3BQ96NL0 473 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 TSG101Q99816 390 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 CADM1Q9BY67 442 aaKnown RBP14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 A0A0J9YVX5 310 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 TRAF5O00463 557 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 MSH4O15457 936 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 KRT18P05783 430 aaKnown RBP14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 VAV1P15498 845 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 SERPINB3P29508 390 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 EXOC3L4Q17RC7 722 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 CFAP61Q8NHU2 1237 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 SPOCK2Q92563 424 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 NMD3Q96D46 503 aaKnown RBP14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 OLFM3Q96PB7 478 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 METTL14Q9HCE5 456 aaKnown RBP14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 PARP2Q9UGN5 583 aa14.88□□□□□ -0.03
GTF3C1-203ENST00000562609 TBK1Q9UHD2 729 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms