RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 NSUN3Q9H649 340 aaKnown RBP10.43□□□□□ -0.74
LINC00566-201ENST00000561557 ALG13Q9NP73 1137 aaKnown RBP10.43□□□□□ -0.74
LINC00566-201ENST00000561557 TLR9Q9NR96 1032 aa10.43□□□□□ -0.74
LINC00566-201ENST00000561557 TRIP11Q15643 1979 aa10.43□□□□□ -0.74
LINC00566-201ENST00000561557 LACTBL1A8MY62 500 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 NT5C1B-RDH14C9J2C7 533 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 TULP1O00294 542 aaPredicted RBP10.42□□□□□ -0.74
LINC00566-201ENST00000561557 PDXKO00764 312 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 TGFB1I1O43294 461 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 EXTL3O43909 919 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 B4GALT3O60512 393 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 TADA2AO75478 443 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 EFEMP2O95967 443 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 CXCL8P10145 99 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 HOXD13P35453 343 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 PPP1R2P41236 205 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 TNFSF9P41273 254 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 ELAVL2Q12926 359 aaKnown RBP10.42□□□□□ -0.74
LINC00566-201ENST00000561557 PNOCQ13519 176 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 CAMK1Q14012 370 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 SURF1Q15526 300 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 ZBTB6Q15916 424 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 ENOX2Q16206 610 aaKnown RBP10.42□□□□□ -0.74
LINC00566-201ENST00000561557 COBLL1Q53SF7 1204 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 CRELD2Q6UXH1 353 aaPredicted RBP10.42□□□□□ -0.74
LINC00566-201ENST00000561557 TMC7Q7Z402 723 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 SLC9A9Q8IVB4 645 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 GPD1LQ8N335 351 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 GUF1Q8N442 669 aaKnown RBP10.42□□□□□ -0.74
LINC00566-201ENST00000561557 KIAA0895Q8NCT3 520 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 GLIS3Q8NEA6 775 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 MAFAQ8NHW3 353 aaPredicted RBP10.42□□□□□ -0.74
LINC00566-201ENST00000561557 SMARCE1Q969G3 411 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 FBXL18Q96ME1 805 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 AGPAT3Q9NRZ7 376 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 ADAM28Q9UKQ2 775 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 UBQLN1Q9UMX0 589 aaKnown RBP10.42□□□□□ -0.74
LINC00566-201ENST00000561557 C2CD2Q9Y426 696 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 PCDHGA10Q9Y5H3 936 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 PCDHA5Q9Y5H7 936 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 IRAK3Q9Y616 596 aa10.42□□□□□ -0.74
LINC00566-201ENST00000561557 PRRC2BQ5JSZ5 2229 aaKnown RBP10.41□□□□□ -0.74
LINC00566-201ENST00000561557 ZNF233A6NK53 670 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 TISP43B9A030 160 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 TRAPPC3O43617 180 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 CALUO43852 315 aaPredicted RBP10.41□□□□□ -0.74
LINC00566-201ENST00000561557 SOD2P04179 222 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 CTSAP10619 480 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 DNAJB1P25685 340 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 LRPAP1P30533 357 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 PBX3P40426 434 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 ACOT2P49753 483 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 ERVFC1P60507 584 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 SMC1AQ14683 1233 aaKnown RBP10.41□□□□□ -0.74
LINC00566-201ENST00000561557 NFIL3Q16649 462 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 UPP1Q16831 310 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 SEZ6Q53EL9 994 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 ZNF658Q5TYW1 1059 aaPredicted RBP10.41□□□□□ -0.74
LINC00566-201ENST00000561557 SMYD5Q6GMV2 418 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 BRSK2Q8IWQ3 736 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 NELFCDQ8IXH7 590 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 RNF168Q8IYW5 571 aaPredicted RBP10.41□□□□□ -0.74
LINC00566-201ENST00000561557 VPS52Q8N1B4 723 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 XXYLT1Q8NBI6 393 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 BEST2Q8NFU1 509 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 MICAL1Q8TDZ2 1067 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 CACTINQ8WUQ7 758 aaKnown RBP10.41□□□□□ -0.74
LINC00566-201ENST00000561557 ZMAT2Q96NC0 199 aaKnown RBP10.41□□□□□ -0.74
LINC00566-201ENST00000561557 CBWD1Q9BRT8 395 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 FAM213AQ9BRX8 229 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 HERC2P3Q9BVR0 1158 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 ZBP1Q9H171 429 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 KCTD10Q9H3F6 313 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 LMBRD1Q9NUN5 540 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 MARCH5Q9NX47 278 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 HSPBP1Q9NZL4 362 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 TRAF3IP3Q9Y228 551 aa10.41□□□□□ -0.74
LINC00566-201ENST00000561557 PRG3Q9Y2Y8 225 aaPredicted RBP10.41□□□□□ -0.74
LINC00566-201ENST00000561557 COL4A4P53420 1690 aaPredicted RBP10.41□□□□□ -0.74
LINC00566-201ENST00000561557 SF3B1O75533 1304 aaKnown RBP eCLIP10.4□□□□□ -0.74
LINC00566-201ENST00000561557 CASTOR2A6NHX0 329 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 MEFVO15553 781 aaPredicted RBP10.4□□□□□ -0.74
LINC00566-201ENST00000561557 CXCL14O95715 111 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 C1RP00736 705 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 TMEM132DQ14C87 1099 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 USP41Q3LFD5 358 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 TCEAL5Q5H9L2 206 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 GLRA4Q5JXX5 417 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 ZBTB41Q5SVQ8 909 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 SPATA1Q5VX52 437 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 FUT10Q6P4F1 479 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 PDXDC1Q6P996 788 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 TMEM173Q86WV6 379 aaPredicted RBP10.4□□□□□ -0.74
LINC00566-201ENST00000561557 MRPL43Q8N983 215 aaKnown RBP10.4□□□□□ -0.74
LINC00566-201ENST00000561557 SAAL1Q96ER3 474 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 TCF25Q9BQ70 676 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 CXCL16Q9H2A7 254 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 IKZF4Q9H2S9 585 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 PCIF1Q9H4Z3 704 aa10.4□□□□□ -0.74
LINC00566-201ENST00000561557 ENTPD7Q9NQZ7 604 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms