RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 TRIP11Q15643 1979 aa10.96□□□□□ -0.66
TPM1-225ENST00000560679 SPAG17Q6Q759 2223 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 TBX3O15119 743 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 DGAT1O75907 488 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 ABLIM3O94929 683 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 SLITRK3O94933 977 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 LYPLA2O95372 231 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 SEC24AO95486 1093 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 PTPN2P17706 415 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 PSMC3P17980 439 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 RPS6KB1P23443 525 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 CNR2P34972 360 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 VIPR2P41587 438 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 BRCC3P46736 316 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 SOX9P48436 509 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 RARRES1P49788 294 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 EVCP57679 992 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 AASDHQ4L235 1098 aaPredicted RBP10.95□□□□□ -0.66
TPM1-225ENST00000560679 GLRA4Q5JXX5 417 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 SLC8B1Q6J4K2 584 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 TXNDC11Q6PKC3 985 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 KRT25Q7Z3Z0 450 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 HS6ST3Q8IZP7 471 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 SMARCD2Q92925 531 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 RSPRY1Q96DX4 576 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 PPP1R10Q96QC0 940 aaKnown RBP10.95□□□□□ -0.66
TPM1-225ENST00000560679 ANP32EQ9BTT0 268 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 FZD8Q9H461 694 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 TRPV4Q9HBA0 871 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 GOLGA2P5Q9HBQ8 144 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 SH2B1Q9NRF2 756 aaPredicted RBP10.95□□□□□ -0.66
TPM1-225ENST00000560679 PRMT7Q9NVM4 692 aaPredicted RBP10.95□□□□□ -0.66
TPM1-225ENST00000560679 KCNJ14Q9UNX9 436 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 USP20Q9Y2K6 914 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 NBEAQ8NFP9 2946 aa10.95□□□□□ -0.66
TPM1-225ENST00000560679 DSPP15924 2871 aaKnown RBP10.95□□□□□ -0.66
TPM1-225ENST00000560679 SDK1Q7Z5N4 2213 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 ITPR1Q14643 2758 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 EML5Q05BV3 1969 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 DMXL2Q8TDJ6 3036 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 LRRIQ4A6NIV6 560 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 C1QTNF9BB2RNN3 333 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 FOXD2O60548 495 aaPredicted RBP10.94□□□□□ -0.66
TPM1-225ENST00000560679 CCNT1O60563 726 aaKnown RBP10.94□□□□□ -0.66
TPM1-225ENST00000560679 USO1O60763 962 aaKnown RBP10.94□□□□□ -0.66
TPM1-225ENST00000560679 B3GAT3O94766 335 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 MICAL2O94851 1124 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 LRG1P02750 347 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 PRKCBP05771 671 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 C1QTNF9P0C862 333 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 GCFC2P16383 781 aaKnown RBP10.94□□□□□ -0.66
TPM1-225ENST00000560679 RBM25P49756 843 aaKnown RBP10.94□□□□□ -0.66
TPM1-225ENST00000560679 CLCNKBP51801 687 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 UPP1Q16831 310 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 FAM187BQ17R55 369 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 EARS2Q5JPH6 523 aaKnown RBP10.94□□□□□ -0.66
TPM1-225ENST00000560679 EEF1DP3Q658K8 133 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 BLOC1S2Q6QNY1 142 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 ANKS3Q6ZW76 656 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 NEK8Q86SG6 692 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 NOSTRINQ8IVI9 506 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 TPH2Q8IWU9 490 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 ZNF461Q8TAF7 563 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 DEPDC1BQ8WUY9 529 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 PRIMPOLQ96LW4 560 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 HSD17B14Q9BPX1 270 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 EIF2AK1Q9BQI3 630 aaKnown RBP10.94□□□□□ -0.66
TPM1-225ENST00000560679 ARRDC1-AS1Q9H2J1 176 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 SMOC1Q9H4F8 434 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 ANKEF1Q9NU02 776 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 ZMIZ1Q9ULJ6 1067 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 INSL5Q9Y5Q6 135 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 SNX14Q9Y5W7 946 aa10.94□□□□□ -0.66
TPM1-225ENST00000560679 KIF26AQ9ULI4 1882 aaPredicted RBP10.93□□□□□ -0.66
TPM1-225ENST00000560679 FAM205CA6NFA0 338 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 SLC38A8A6NNN8 435 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 HEPACAM2A8MVW5 462 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 PRRG1O14668 218 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 ZNF263O14978 683 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 N4BP3O15049 544 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 AXIN1O15169 862 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 EPN2O95208 641 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 KCNK5O95279 499 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 DEXIO95424 95 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 ZNF806P0C7X5 589 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 GJA1P17302 382 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 EPHA5P54756 1037 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 SOX4Q06945 474 aaPredicted RBP10.93□□□□□ -0.66
TPM1-225ENST00000560679 SSRP1Q08945 709 aaKnown RBP10.93□□□□□ -0.66
TPM1-225ENST00000560679 TOB2Q14106 344 aaPredicted RBP10.93□□□□□ -0.66
TPM1-225ENST00000560679 PLA2G2CQ5R387 149 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 STPG1Q5TH74 334 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 GALNT17Q6IS24 598 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 UNQ6494/PRO21346Q6UXR6 183 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 PDZD4Q76G19 769 aaPredicted RBP10.93□□□□□ -0.66
TPM1-225ENST00000560679 CEP68Q76N32 757 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 WDR5BQ86VZ2 330 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 MFSD6LQ8IWD5 586 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 TRIM22Q8IYM9 498 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 TCEAL8Q8IYN2 117 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms