RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 NSUN6Q8TEA1 469 aaKnown RBP6.31□□□□□ -1.4
CRNDE-208ENST00000560029 MIEF2Q96C03 454 aa6.31□□□□□ -1.4
CRNDE-208ENST00000560029 RUNDC1Q96C34 613 aa6.31□□□□□ -1.4
CRNDE-208ENST00000560029 PGBD4Q96DM1 585 aa6.31□□□□□ -1.4
CRNDE-208ENST00000560029 C8orf48Q96LL4 319 aa6.31□□□□□ -1.4
CRNDE-208ENST00000560029 DMRTA2Q96SC8 542 aa6.31□□□□□ -1.4
CRNDE-208ENST00000560029 ACO2Q99798 780 aaKnown RBP6.31□□□□□ -1.4
CRNDE-208ENST00000560029 VRK1Q99986 396 aaPredicted RBP6.31□□□□□ -1.4
CRNDE-208ENST00000560029 ATRNL1Q5VV63 1379 aa6.31□□□□□ -1.4
CRNDE-208ENST00000560029 CTNND1O60716 968 aaKnown RBP6.3□□□□□ -1.4
CRNDE-208ENST00000560029 FTLP02792 175 aaPredicted RBP6.3□□□□□ -1.4
CRNDE-208ENST00000560029 RAP2AP10114 183 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 MAN2A2P49641 1150 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 FLT3LGP49771 235 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 MRPS21P82921 87 aaKnown RBP6.3□□□□□ -1.4
CRNDE-208ENST00000560029 ATP8B2P98198 1209 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 MTM1Q13496 603 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 ELAVL1Q15717 326 aaKnown RBP6.3□□□□□ -1.4
CRNDE-208ENST00000560029 FAM47AQ5JRC9 791 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 ZBTB34Q8NCN2 500 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 SLC35B2Q8TB61 432 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 IFI44Q8TCB0 444 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 HAS1Q92839 578 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 RGMAQ96B86 450 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 C1GALT1C1Q96EU7 318 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 MRGPRX4Q96LA9 322 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 MLST8Q9BVC4 326 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 GPR87Q9BY21 358 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 KCNH6Q9H252 994 aa6.3□□□□□ -1.4
CRNDE-208ENST00000560029 DDX20Q9UHI6 824 aaKnown RBP6.3□□□□□ -1.4
CRNDE-208ENST00000560029 XDHP47989 1333 aa6.29□□□□□ -1.4
CRNDE-208ENST00000560029 ERC2O15083 957 aa6.29□□□□□ -1.4
CRNDE-208ENST00000560029 MAP2K6P52564 334 aa6.29□□□□□ -1.4
CRNDE-208ENST00000560029 ZNF280AP59817 542 aaPredicted RBP6.29□□□□□ -1.4
CRNDE-208ENST00000560029 KHDC1Q4VXA5 237 aaKnown RBP6.29□□□□□ -1.4
CRNDE-208ENST00000560029 CCDC157Q569K6 752 aa6.29□□□□□ -1.4
CRNDE-208ENST00000560029 GADL1Q6ZQY3 521 aa6.29□□□□□ -1.4
CRNDE-208ENST00000560029 ELOA2Q8IYF1 753 aaPredicted RBP6.29□□□□□ -1.4
CRNDE-208ENST00000560029 CASKIN2Q8WXE0 1202 aa6.29□□□□□ -1.4
CRNDE-208ENST00000560029 CGRRF1Q99675 332 aa6.29□□□□□ -1.4
CRNDE-208ENST00000560029 MYOCQ99972 504 aa6.29□□□□□ -1.4
CRNDE-208ENST00000560029 CPPED1Q9BRF8 314 aaPredicted RBP6.29□□□□□ -1.4
CRNDE-208ENST00000560029 RIOX1Q9H6W3 641 aa6.29□□□□□ -1.4
CRNDE-208ENST00000560029 KMT5AQ9NQR1 393 aa6.29□□□□□ -1.4
CRNDE-208ENST00000560029 OBP2AQ9NY56 170 aa6.29□□□□□ -1.4
CRNDE-208ENST00000560029 MOCS1Q9NZB8 636 aa6.29□□□□□ -1.4
CRNDE-208ENST00000560029 PCDHA3Q9Y5H8 950 aa6.29□□□□□ -1.4
CRNDE-208ENST00000560029 CXorf49A8MYA2 514 aaPredicted RBP6.28□□□□□ -1.4
CRNDE-208ENST00000560029 GNAT2P19087 354 aa6.28□□□□□ -1.4
CRNDE-208ENST00000560029 GRM3Q14832 879 aa6.28□□□□□ -1.4
CRNDE-208ENST00000560029 MFSD5Q6N075 450 aa6.28□□□□□ -1.4
CRNDE-208ENST00000560029 DENND1CQ8IV53 801 aa6.28□□□□□ -1.4
CRNDE-208ENST00000560029 MB21D1Q8N884 522 aa6.28□□□□□ -1.4
CRNDE-208ENST00000560029 C3orf20Q8ND61 904 aa6.28□□□□□ -1.4
CRNDE-208ENST00000560029 NTN5Q8WTR8 489 aaPredicted RBP6.28□□□□□ -1.4
CRNDE-208ENST00000560029 SLC25A43Q8WUT9 341 aaPredicted RBP6.28□□□□□ -1.4
CRNDE-208ENST00000560029 MRI1Q9BV20 369 aa6.28□□□□□ -1.4
CRNDE-208ENST00000560029 LSM14BQ9BX40 385 aaKnown RBP6.28□□□□□ -1.4
CRNDE-208ENST00000560029 SLC23A1Q9UHI7 598 aa6.28□□□□□ -1.4
CRNDE-208ENST00000560029 ZNHIT2Q9UHR6 403 aa6.28□□□□□ -1.4
CRNDE-208ENST00000560029 HDAC5Q9UQL6 1122 aa6.28□□□□□ -1.4
CRNDE-208ENST00000560029 NR2E3Q9Y5X4 410 aa6.28□□□□□ -1.4
CRNDE-208ENST00000560029 MASP2O00187 686 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 UBXN7O94888 489 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 ATP5JP18859 108 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 PTGS2P35354 604 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 ATXN1P54253 815 aaKnown RBP6.27□□□□□ -1.41
CRNDE-208ENST00000560029 CTXN1P60606 82 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 RAP2BP61225 183 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 TLE1Q04724 770 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 NOGQ13253 232 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 SNAPC2Q13487 334 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 RAB39AQ14964 217 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 THEMIS2Q5TEJ8 643 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 CCDC181Q5TID7 509 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 NOL8Q76FK4 1167 aaKnown RBP6.27□□□□□ -1.41
CRNDE-208ENST00000560029 OVCH2Q7RTZ1 564 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 APBB1IPQ7Z5R6 666 aaPredicted RBP6.27□□□□□ -1.41
CRNDE-208ENST00000560029 DCBLD1Q8N8Z6 715 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 ST8SIA2Q92186 375 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 TIFAQ96CG3 184 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 CCDC136Q96JN2 1154 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 PTGFRNQ9P2B2 879 aa6.27□□□□□ -1.41
CRNDE-208ENST00000560029 TBKBP1A7MCY6 615 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 B5MCH6 92 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 H3BML4 177 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 KIF3BO15066 747 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 SLC16A6O15403 523 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 TEX33O43247 280 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 LMNAP02545 664 aaKnown RBP6.26□□□□□ -1.41
CRNDE-208ENST00000560029 HK1P19367 917 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 MALP21145 153 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 HTR1BP28222 390 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 HK3P52790 923 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 LLGL1Q15334 1064 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 OTUD7BQ6GQQ9 843 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 HEATR3Q7Z4Q2 680 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 FAM83AQ86UY5 434 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 PLXDC1Q8IUK5 500 aa6.26□□□□□ -1.41
CRNDE-208ENST00000560029 ZNF276Q8N554 614 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms