RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 GDAP1L1Q96MZ0 367 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 FMO2Q99518 471 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 CGRRF1Q99675 332 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 FAM213AQ9BRX8 229 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 TMEM109Q9BVC6 243 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 NUP85Q9BW27 656 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 IMPG2Q9BZV3 1241 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 ZNF518BQ9C0D4 1074 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 DDX47Q9H0S4 455 aaKnown RBP8.9□□□□□ -0.98
SPG11-209ENST00000558253 LRRC19Q9H756 370 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 CNOT10Q9H9A5 744 aaKnown RBP8.9□□□□□ -0.98
SPG11-209ENST00000558253 SLC24A3Q9HC58 644 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 XPNPEP1Q9NQW7 623 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 TAS2R14Q9NYV8 317 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 AMACRQ9UHK6 382 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 COG5Q9UP83 839 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 PLAAQ9Y263 795 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 BCS1LQ9Y276 419 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 CSADQ9Y600 493 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 SCINQ9Y6U3 715 aa8.9□□□□□ -0.98
SPG11-209ENST00000558253 PASKQ96RG2 1323 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 ATXN2Q99700 1313 aaKnown RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 EP400Q96L91 3159 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 GOLGA8IPA6NC78 632 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 GOLGA8JA6NMD2 632 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 MYO1FO00160 1098 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 EBAG9O00559 213 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 CXCL11O14625 94 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 FSCN2O14926 492 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 ASAP2O43150 1006 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 THAP12O43422 761 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 ADCY3O60266 1144 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 GRIN3BO60391 1043 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 MAFO75444 373 aaPredicted RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 LSM8O95777 96 aaKnown RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 C4BPAP04003 597 aaKnown RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 CFHP08603 1231 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 NUDT17P0C025 328 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 FAM153BP0C7A2 387 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 UNGP13051 313 aaPredicted RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 NR1D1P20393 614 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 ECHS1P30084 290 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 NSFP46459 744 aaKnown RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 ALDH5A1P51649 535 aaPredicted RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 GUCY2FP51841 1108 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 YWHAEP62258 255 aaKnown RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 LMNB2Q03252 620 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 MESDQ14696 234 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 TARBP2Q15633 366 aaKnown RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 KYAT1Q16773 422 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 FAM153CQ494X1 144 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 TJAP1Q5JTD0 557 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 CEP85LQ5SZL2 805 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 SLC39A4Q6P5W5 647 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 METTL7BQ6UX53 244 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 PLPPR4Q7Z2D5 763 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 ARMC9Q7Z3E5 817 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 TMC3Q7Z5M5 1100 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 SLC47A2Q86VL8 602 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 SLC13A5Q86YT5 568 aaPredicted RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 CCDC60Q8IWA6 550 aaPredicted RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 CCHCR1Q8TD31 782 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 TAS1R2Q8TE23 839 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 GTF3C2Q8WUA4 911 aaPredicted RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 BSNDQ8WZ55 320 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 MAGOHBQ96A72 148 aaKnown RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 SAAL1Q96ER3 474 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 PCDHB18PQ96TA0 734 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 REPIN1Q9BWE0 567 aaKnown RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 TXLNGYQ9BZA5 131 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 FOXP3Q9BZS1 431 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 PABPC3Q9H361 631 aaKnown RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 FAM124BQ9H5Z6 455 aaPredicted RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 AZI2Q9H6S1 392 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 GEMIN8Q9NWZ8 242 aaKnown RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 CNOT8Q9UFF9 292 aaKnown RBP8.89□□□□□ -0.99
SPG11-209ENST00000558253 FAM153AQ9UHL3 310 aa8.89□□□□□ -0.99
SPG11-209ENST00000558253 MYH10P35580 1976 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 ESYT3A0FGR9 886 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 TISP43B9A030 160 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 H0YGN5 161 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 TTI1O43156 1089 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 DAPK3O43293 454 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 PSTPIP1O43586 416 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 USP2O75604 605 aaPredicted RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 TOM1L1O75674 476 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 ZBTB7AO95365 584 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 HLA-DRAP01903 254 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 CYP1A1P04798 512 aaPredicted RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 MMEP08473 750 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 DLATP10515 647 aaKnown RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 ITGA4P13612 1032 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 KRT5P13647 590 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 TNNI1P19237 187 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 ITIH2P19823 946 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 MAPK4P31152 587 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 PIK3CAP42336 1068 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 PTGIRP43119 386 aa8.88□□□□□ -0.99
SPG11-209ENST00000558253 IREB2P48200 963 aaKnown RBP8.88□□□□□ -0.99
SPG11-209ENST00000558253 STAT5BP51692 787 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms