RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 HMX2A2RU54 273 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 MBD3L4A6NDZ8 208 aaPredicted RBP4.34□□□□□ -1.71
TDP1-217ENST00000557782 MBD3L3A6NE82 208 aaPredicted RBP4.34□□□□□ -1.71
TDP1-217ENST00000557782 B4DLN1 442 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 BTN3A1O00481 513 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 PIP5K1BO14986 540 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 DAPK3O43293 454 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 PRAMEF4O60810 478 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 MAFO75444 373 aaPredicted RBP4.34□□□□□ -1.71
TDP1-217ENST00000557782 TIPRLO75663 272 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 ZBTB7AO95365 584 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 TNFRSF6BO95407 300 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 NDST3O95803 873 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 NCAM1P13591 858 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 KLRC1P26715 233 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 CALRP27797 417 aaKnown RBP4.34□□□□□ -1.71
TDP1-217ENST00000557782 SLC6A9P48067 706 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 FLT3LGP49771 235 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 CYP4F8P98187 520 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 CHRNEQ04844 493 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 UBE3AQ05086 875 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 HABP2Q14520 560 aaPredicted RBP4.34□□□□□ -1.71
TDP1-217ENST00000557782 KIF22Q14807 665 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 DLGAP5Q15398 846 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 SURF1Q15526 300 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 CFAP58Q5T655 872 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 MFSD4BQ5TF39 518 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 LIN54Q6MZP7 749 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 LRSAM1Q6UWE0 723 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 TXNRD3Q86VQ6 643 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 CPOQ8IVL8 374 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 OR5AN1Q8NGI8 311 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 IFI44Q8TCB0 444 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 OTUD7AQ8TE49 926 aaPredicted RBP4.34□□□□□ -1.71
TDP1-217ENST00000557782 AFG1LQ8WV93 481 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 THAP4Q8WY91 577 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 RFFLQ8WZ73 363 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 MAML1Q92585 1016 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 SNX27Q96L92 541 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 C7orf26Q96N11 449 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 KCNC2Q96PR1 638 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 PRPF18Q99633 342 aaKnown RBP4.34□□□□□ -1.71
TDP1-217ENST00000557782 BTBD2Q9BX70 525 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 OSBPL1AQ9BXW6 950 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 DPH1Q9BZG8 443 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 CCDC68Q9H2F9 335 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 C7orf69Q9H7B7 122 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 PREBQ9HCU5 417 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 SLC39A2Q9NP94 309 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 LANCL2Q9NS86 450 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 POLR3BQ9NW08 1133 aaPredicted RBP4.34□□□□□ -1.71
TDP1-217ENST00000557782 RGL1Q9NZL6 768 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 IGSF9Q9P2J2 1179 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 FEM1BQ9UK73 627 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 GPR34Q9UPC5 381 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 RAXQ9Y2V3 346 aa4.34□□□□□ -1.71
TDP1-217ENST00000557782 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.34□□□□□ -1.71
TDP1-217ENST00000557782 MYBBP1AQ9BQG0 1328 aaKnown RBP4.34□□□□□ -1.71
TDP1-217ENST00000557782 RPGRIP1LQ68CZ1 1315 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 A0A1W2PPH5 198 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 HMX3A6NHT5 357 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 ZNF839A8K0R7 811 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 NT5C1B-RDH14C9J2C7 533 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 ASNA1O43681 348 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 GPR32O75388 356 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 FAM155BO75949 473 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 FSBPO95073 299 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 AHSGP02765 367 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 F13BP05160 661 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 GNAI3P08754 354 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 HNRNPLP14866 589 aaKnown RBP eCLIP4.33□□□□□ -1.72
TDP1-217ENST00000557782 CST5P28325 142 aaPredicted RBP4.33□□□□□ -1.72
TDP1-217ENST00000557782 PIK3CGP48736 1102 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 DRG2P55039 364 aaKnown RBP4.33□□□□□ -1.72
TDP1-217ENST00000557782 NR1H2P55055 460 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 GNAI1P63096 354 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 ZNF200P98182 395 aaPredicted RBP4.33□□□□□ -1.72
TDP1-217ENST00000557782 SLC12A1Q13621 1099 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 KRT32Q14532 448 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 MEA1Q16626 185 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 CPSF6Q16630 551 aaKnown RBP eCLIP4.33□□□□□ -1.72
TDP1-217ENST00000557782 ATP2B3Q16720 1220 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 FAM26FQ5R3K3 315 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 EMC10Q5UCC4 262 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 RRAGBQ5VZM2 374 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 LMBRD2Q68DH5 695 aaPredicted RBP4.33□□□□□ -1.72
TDP1-217ENST00000557782 USP17L6PQ6QN14 398 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 UNC13DQ70J99 1090 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 FAM90A1Q86YD7 464 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 SPPL2CQ8IUH8 684 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 HERC6Q8IVU3 1022 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 YAF2Q8IY57 180 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 PLD6Q8N2A8 252 aaKnown RBP4.33□□□□□ -1.72
TDP1-217ENST00000557782 PQLC1Q8N2U9 271 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 TTC30BQ8N4P2 665 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 SVOPQ8N4V2 548 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 ANKRD52Q8NB46 1076 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 ZNF480Q8WV37 535 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 SNX33Q8WV41 574 aa4.33□□□□□ -1.72
TDP1-217ENST00000557782 TNPO1Q92973 898 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms