RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 ZNF579Q8NAF0 562 aaKnown RBP13.92□□□□□ -0.18
PSEN1-220ENST00000557037 PSPC1Q8WXF1 523 aaKnown RBP13.92□□□□□ -0.18
PSEN1-220ENST00000557037 CCDC51Q96ER9 411 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 CRELD1Q96HD1 420 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 JPH2Q9BR39 696 aaPredicted RBP13.92□□□□□ -0.18
PSEN1-220ENST00000557037 TEKT3Q9BXF9 490 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 CCDC86Q9H6F5 360 aaKnown RBP13.92□□□□□ -0.18
PSEN1-220ENST00000557037 TRPV4Q9HBA0 871 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 SLC12A7Q9Y666 1083 aa13.92□□□□□ -0.18
PSEN1-220ENST00000557037 THADAQ6YHU6 1953 aa13.91□□□□□ -0.18
PSEN1-220ENST00000557037 CELSR3Q9NYQ7 3312 aa13.91□□□□□ -0.18
PSEN1-220ENST00000557037 C1QL1O75973 258 aa13.91□□□□□ -0.18
PSEN1-220ENST00000557037 MICAL2O94851 1124 aa13.91□□□□□ -0.18
PSEN1-220ENST00000557037 NPTXRO95502 500 aa13.91□□□□□ -0.18
PSEN1-220ENST00000557037 FGFR3P22607 806 aa13.91□□□□□ -0.18
PSEN1-220ENST00000557037 ARPP19P56211 112 aa13.91□□□□□ -0.18
PSEN1-220ENST00000557037 FAM193AP78312 1265 aa13.91□□□□□ -0.18
PSEN1-220ENST00000557037 ELAVL2Q12926 359 aaKnown RBP13.91□□□□□ -0.18
PSEN1-220ENST00000557037 CYP2U1Q7Z449 544 aa13.91□□□□□ -0.18
PSEN1-220ENST00000557037 MDM1Q8TC05 714 aa13.91□□□□□ -0.18
PSEN1-220ENST00000557037 GLT8D2Q9H1C3 349 aa13.91□□□□□ -0.18
PSEN1-220ENST00000557037 CYP4F11Q9HBI6 524 aa13.91□□□□□ -0.18
PSEN1-220ENST00000557037 BARHL2Q9NY43 387 aa13.91□□□□□ -0.18
PSEN1-220ENST00000557037 I3L4J1 428 aa13.9□□□□□ -0.18
PSEN1-220ENST00000557037 SEC24AO95486 1093 aa13.9□□□□□ -0.18
PSEN1-220ENST00000557037 AXLP30530 894 aa13.9□□□□□ -0.18
PSEN1-220ENST00000557037 RDXP35241 583 aaKnown RBP13.9□□□□□ -0.18
PSEN1-220ENST00000557037 TNK2Q07912 1038 aa13.9□□□□□ -0.18
PSEN1-220ENST00000557037 TMTC2Q8N394 836 aa13.9□□□□□ -0.18
PSEN1-220ENST00000557037 EXOC6Q8TAG9 804 aa13.9□□□□□ -0.18
PSEN1-220ENST00000557037 SLC7A3Q8WY07 619 aa13.9□□□□□ -0.18
PSEN1-220ENST00000557037 PIGKQ92643 395 aa13.9□□□□□ -0.18
PSEN1-220ENST00000557037 SLC5A5Q92911 643 aa13.9□□□□□ -0.18
PSEN1-220ENST00000557037 LRRC3BQ96PB8 259 aa13.9□□□□□ -0.18
PSEN1-220ENST00000557037 RIT2Q99578 217 aa13.9□□□□□ -0.18
PSEN1-220ENST00000557037 LRRC2Q9BYS8 371 aa13.9□□□□□ -0.18
PSEN1-220ENST00000557037 CXCL16Q9H2A7 254 aa13.9□□□□□ -0.18
PSEN1-220ENST00000557037 SHROOM3Q8TF72 1996 aa13.9□□□□□ -0.18
PSEN1-220ENST00000557037 PIEZO2Q9H5I5 2752 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 KIF26AQ9ULI4 1882 aaPredicted RBP13.89□□□□□ -0.19
PSEN1-220ENST00000557037 H0Y626 953 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 INO80B-WBP1J3KQ70 363 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 ATG13O75143 517 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 TRIM16O95361 564 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 ARF4P18085 180 aaPredicted RBP13.89□□□□□ -0.19
PSEN1-220ENST00000557037 TKTP29401 623 aaKnown RBP13.89□□□□□ -0.19
PSEN1-220ENST00000557037 CIITAP33076 1130 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 PI4KAP42356 2102 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 ROR1Q01973 937 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 NCBP1Q09161 790 aaKnown RBP13.89□□□□□ -0.19
PSEN1-220ENST00000557037 FCHO2Q0JRZ9 810 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 IQCEQ6IPM2 695 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 RAB44Q7Z6P3 723 aaPredicted RBP13.89□□□□□ -0.19
PSEN1-220ENST00000557037 PIP4P1Q86T03 277 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 PLEKHM2Q8IWE5 1019 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 CAMKK1Q8N5S9 505 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 ZNF461Q8TAF7 563 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 SHKBP1Q8TBC3 707 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 E2F7Q96AV8 911 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 DDX27Q96GQ7 796 aaKnown RBP13.89□□□□□ -0.19
PSEN1-220ENST00000557037 TMEM209Q96SK2 561 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 INSL5Q9Y5Q6 135 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 BACE2Q9Y5Z0 518 aa13.89□□□□□ -0.19
PSEN1-220ENST00000557037 CCDC194A0A1B0GVG4 234 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 PTGESO14684 152 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 B4GALT5O43286 388 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 PRKCBP05771 671 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 DHPSP49366 369 aaPredicted RBP13.88□□□□□ -0.19
PSEN1-220ENST00000557037 KARSQ15046 597 aaKnown RBP13.88□□□□□ -0.19
PSEN1-220ENST00000557037 PMS2CLQ68D20 193 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 B4GALNT3Q6L9W6 998 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 FSTL4Q6MZW2 842 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 FERMT3Q86UX7 667 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 ELMOD1Q8N336 334 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 RDM1Q8NG50 284 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 SLC39A7Q92504 469 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 CCDC136Q96JN2 1154 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 CEP170P1Q96L14 293 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 ZNF512Q96ME7 567 aaPredicted RBP13.88□□□□□ -0.19
PSEN1-220ENST00000557037 SCUBE2Q9NQ36 999 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 CEP72Q9P209 647 aa13.88□□□□□ -0.19
PSEN1-220ENST00000557037 RNF40O75150 1001 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 ABLIM3O94929 683 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 BCKDHBP21953 392 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 MCM5P33992 734 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 PTENP60484 403 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 FUT2Q10981 343 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 AMHR2Q16671 573 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 TRIM61Q5EBN2 209 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 STXBP5Q5T5C0 1151 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 ANKS3Q6ZW76 656 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 ZNF605Q86T29 641 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 TCEAL8Q8IYN2 117 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 REXO1Q8N1G1 1221 aaKnown RBP13.87□□□□□ -0.19
PSEN1-220ENST00000557037 TMEM87BQ96K49 555 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 ASAH2Q9NR71 780 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 RAI2Q9Y5P3 530 aa13.87□□□□□ -0.19
PSEN1-220ENST00000557037 GOLGA4Q13439 2230 aaKnown RBP13.86□□□□□ -0.19
PSEN1-220ENST00000557037 hCG_1984214I3L0E3 225 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 EDIL3O43854 480 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms