RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 CCDC40Q4G0X9 1142 aa12.41□□□□□ -0.42
GABRB3-210ENST00000556166 C15orf39Q6ZRI6 1047 aa12.41□□□□□ -0.42
GABRB3-210ENST00000556166 TMEM173Q86WV6 379 aaPredicted RBP12.41□□□□□ -0.42
GABRB3-210ENST00000556166 WDR49Q8IV35 697 aa12.41□□□□□ -0.42
GABRB3-210ENST00000556166 FNBP1Q96RU3 617 aa12.41□□□□□ -0.42
GABRB3-210ENST00000556166 C17orf80Q9BSJ5 609 aa12.41□□□□□ -0.42
GABRB3-210ENST00000556166 MRPL9Q9BYD2 267 aaKnown RBP12.41□□□□□ -0.42
GABRB3-210ENST00000556166 DPP3Q9NY33 737 aa12.41□□□□□ -0.42
GABRB3-210ENST00000556166 ANO9A1A5B4 782 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 KCNJ18B7U540 433 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 NRP1O14786 923 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 ZC3H11AO75152 810 aaKnown RBP eCLIP12.4□□□□□ -0.42
GABRB3-210ENST00000556166 LRRN2O75325 713 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 VNN1O95497 513 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 GNA14O95837 355 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 CST3P01034 146 aaPredicted RBP12.4□□□□□ -0.42
GABRB3-210ENST00000556166 ATP1A3P13637 1013 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 CYP3A5P20815 502 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 LRPAP1P30533 357 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 CLCNKBP51801 687 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 ENPEPQ07075 957 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 KCNJ12Q14500 433 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 SURF1Q15526 300 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 UPP1Q16831 310 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 TCP11X2Q5H9J9 407 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 TDRD10Q5VZ19 366 aaKnown RBP12.4□□□□□ -0.42
GABRB3-210ENST00000556166 KCNT2Q6UVM3 1135 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 SV2AQ7L0J3 742 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 APTXQ7Z2E3 356 aaKnown RBP12.4□□□□□ -0.42
GABRB3-210ENST00000556166 TRAPPC11Q7Z392 1133 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 CREBRFQ8IUR6 639 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 COLGALT1Q8NBJ5 622 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 C3orf58Q8NDZ4 430 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 RSPH1Q8WYR4 309 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 ELMO3Q96BJ8 720 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 METTL14Q9HCE5 456 aaKnown RBP12.4□□□□□ -0.42
GABRB3-210ENST00000556166 SLC38A7Q9NVC3 462 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 MSRAQ9UJ68 235 aa12.4□□□□□ -0.42
GABRB3-210ENST00000556166 UBQLN1Q9UMX0 589 aaKnown RBP12.4□□□□□ -0.42
GABRB3-210ENST00000556166 PIRO00625 290 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 SPTLC1O15269 473 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 CAVIN2O95810 425 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 ALDH2P05091 517 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 DNAJB2P25686 324 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 BMPR1AP36894 532 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 OR1G1P47890 313 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 RAB30Q15771 203 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 ZACNQ401N2 412 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 CBWD6Q4V339 395 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 DCAF17Q5H9S7 520 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-210ENST00000556166 CBWD3Q5JTY5 395 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 MIIPQ5JXC2 388 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 CBWD5Q5RIA9 395 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 C9orf57Q5W0N0 161 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 NT5DC4Q86YG4 428 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 BEST2Q8NFU1 509 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 FAM200AQ8TCP9 573 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 CACTINQ8WUQ7 758 aaKnown RBP12.39□□□□□ -0.43
GABRB3-210ENST00000556166 FAM193BQ96PV7 902 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-210ENST00000556166 TMEM175Q9BSA9 504 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 VN1R3Q9BXE9 311 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 RBSNQ9H1K0 784 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 MARCH5Q9NX47 278 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 FAN1Q9Y2M0 1017 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 PRG3Q9Y2Y8 225 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-210ENST00000556166 CHD7Q9P2D1 2997 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 FNDC1Q4ZHG4 1894 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-210ENST00000556166 LRRC10BA6NIK2 292 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 SMTNL1A8MU46 457 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 PODXLO00592 558 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 KIF4AO95239 1232 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 EFEMP2O95967 443 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 GTF2H1P32780 548 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 RPL9P32969 192 aaKnown RBP12.39□□□□□ -0.43
GABRB3-210ENST00000556166 ERVK-21P61565 698 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 KRT31Q15323 416 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 SPOUT1Q5T280 376 aaKnown RBP12.39□□□□□ -0.43
GABRB3-210ENST00000556166 DCLRE1AQ6PJP8 1040 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 TAS1R1Q7RTX1 841 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 SLC39A11Q8N1S5 342 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 RNF214Q8ND24 703 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 SEMA4DQ92854 862 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 TIFAQ96CG3 184 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 DDX27Q96GQ7 796 aaKnown RBP12.39□□□□□ -0.43
GABRB3-210ENST00000556166 MMRN2Q9H8L6 949 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 CERS4Q9HA82 394 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 AGAP1Q9UPQ3 857 aa12.39□□□□□ -0.43
GABRB3-210ENST00000556166 EPOPA6NHQ4 379 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 TNNC2P02585 160 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 ITGB3P05106 788 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 TMEM191BP0C7N4 346 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 LAG3P18627 525 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 POLR2BP30876 1174 aaKnown RBP12.38□□□□□ -0.43
GABRB3-210ENST00000556166 MTIF2P46199 727 aaKnown RBP12.38□□□□□ -0.43
GABRB3-210ENST00000556166 ALDH7A1P49419 539 aaKnown RBP12.38□□□□□ -0.43
GABRB3-210ENST00000556166 MYL6P60660 151 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 KCNH2Q12809 1159 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 EPC2Q52LR7 807 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 TCERG1LQ5VWI1 586 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 FAM114A1Q8IWE2 563 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms