RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PLA2G3Q9NZ20 509 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 CFAP97Q9P2B7 532 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 PCDHA6Q9UN73 950 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 ZNF536O15090 1300 aa6.71□□□□□ -1.34
CKS1BP1-201ENST00000555221 NPEPPSL1A6NEC2 478 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 PRR5-ARHGAP8B1AHC4 643 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 SLC43A1O75387 559 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 POMCP01189 267 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 MORC3Q14149 939 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 LONRF1Q17RB8 773 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 CCDC93Q567U6 631 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 COL23A1Q86Y22 540 aaPredicted RBP6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 SIAH1Q8IUQ4 282 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 KBTBD7Q8WVZ9 684 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 TFAP2CQ92754 450 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 PHKBQ93100 1093 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 TMEM176AQ96HP8 235 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 OR14A2Q96R54 314 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 CPPED1Q9BRF8 314 aaPredicted RBP6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 RSAD1Q9HA92 442 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 ZNF287Q9HBT7 754 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 NLRC4Q9NPP4 1024 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 JKAMPQ9P055 326 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 OGDHLQ9ULD0 1010 aa6.7□□□□□ -1.34
CKS1BP1-201ENST00000555221 TCRBV7S2A1N4TA0A589 114 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 PLEKHD1A6NEE1 506 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 RHPN2P1A8MT19 583 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 MYO1FO00160 1098 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 MFAP3LO75121 409 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 RAD17O75943 681 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 HAUS5O94927 633 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 ZSCAN22P10073 491 aaPredicted RBP6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 KITP10721 976 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 NPR1P16066 1061 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 BMP7P18075 431 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 MGAT1P26572 445 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 TM4SF4P48230 202 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 SOX8P57073 446 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 RAP2BP61225 183 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 METTL24Q5JXM2 366 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 ATXN7L2Q5T6C5 722 aaPredicted RBP6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 ANKS6Q68DC2 871 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 EFCAB12Q6NXP0 572 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 MORC1Q86VD1 984 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 FAM186BQ8IYM0 893 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 FEZF2Q8TBJ5 459 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 PARD3BQ8TEW8 1205 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 ST8SIA2Q92186 375 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 PGBD4Q96DM1 585 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 MRGPRX1Q96LB2 322 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 GNRHR2Q96P88 292 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 TBCBQ99426 244 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 C1orf43Q9BWL3 253 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 BRD9Q9H8M2 597 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 SLC30A1Q9Y6M5 507 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 DUSP10Q9Y6W6 482 aa6.69□□□□□ -1.34
CKS1BP1-201ENST00000555221 MATN4O95460 622 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 LDHAP00338 332 aaKnown RBP6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 PLATP00750 562 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 AHSGP02765 367 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 ANXA1P04083 346 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 SBK3P0C264 359 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 BRAFP15056 766 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 EN2P19622 333 aaPredicted RBP6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 KCNJ5P48544 419 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 ALDH5A1P51649 535 aaPredicted RBP6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 HABP2Q14520 560 aaPredicted RBP6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 KIF22Q14807 665 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 UBXN2BQ14CS0 331 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 ELAVL1Q15717 326 aaKnown RBP6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 CNGA2Q16280 664 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 DRICH1Q6PGQ1 229 aaPredicted RBP6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 ZNF365Q70YC5 407 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 GPRIN1Q7Z2K8 1008 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 UBE3BQ7Z3V4 1068 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 SRLQ86TD4 932 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 DPP9Q86TI2 863 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 XYLT1Q86Y38 959 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 PDSS2Q86YH6 399 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 ACRBPQ8NEB7 543 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 KCNC2Q96PR1 638 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 LSM14BQ9BX40 385 aaKnown RBP6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 SLAMF7Q9NQ25 335 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 PAXBP1Q9Y5B6 917 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 SNX13Q9Y5W8 968 aa6.68□□□□□ -1.34
CKS1BP1-201ENST00000555221 EIF3JO75822 258 aaKnown RBP6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 GNAI2P04899 355 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 GJB1P08034 283 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 RARBP10826 455 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 ZKSCAN1P17029 563 aaPredicted RBP6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 MSX2P35548 267 aaPredicted RBP6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 PIK3CBP42338 1070 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 HHEXQ03014 270 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 EXOSC9Q06265 439 aaKnown RBP6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 TBC1D10BQ4KMP7 808 aaPredicted RBP6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 UBXN11Q5T124 520 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 ZFYVE27Q5T4F4 411 aa6.67□□□□□ -1.34
CKS1BP1-201ENST00000555221 GORABQ5T7V8 394 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms