RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ZNF45Q02386 682 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 SLC45A4Q5BKX6 768 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 POU5F2Q8N7G0 328 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 BORCS5Q969J3 196 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 TRIM51Q9BSJ1 452 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 C12orf71A8MTZ7 269 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 FAM47E-STBD1D6RA91 191 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 GNB5O14775 395 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 ARHGEF15O94989 841 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 EIF2S1P05198 315 aaKnown RBP9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 ADD1P35611 737 aaKnown RBP9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 IL12RB1P42701 662 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 RPL5P46777 297 aaKnown RBP9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 BLMP54132 1417 aaPredicted RBP9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 HSD17B7P56937 341 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 DNAJC3Q13217 504 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 LSAMPQ13449 338 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 LACTB2Q53H82 288 aaPredicted RBP9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 ZNF746Q6NUN9 644 aaPredicted RBP9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 FNDC8Q8TC99 324 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 ATP8B4Q8TF62 1192 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 AENQ8WTP8 325 aaKnown RBP9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 ZFPM2Q8WW38 1151 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 FIG4Q92562 907 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 TUBB6Q9BUF5 446 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 LSG1Q9H089 658 aaKnown RBP9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 SIAEQ9HAT2 523 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 PI4KBQ9UBF8 816 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 TMEM120BA0PK00 339 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 BTN3A3O00478 584 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 ATP2A1O14983 1001 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 STT3AP46977 705 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 OVGP1Q12889 678 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 CCDC85BQ15834 202 aaPredicted RBP9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 CENPSQ8N2Z9 138 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 AGR3Q8TD06 166 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 ASAP3Q8TDY4 903 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 SNX6Q9UNH7 406 aa9.46□□□□□ -0.9
GTF2A1-203ENST00000553612 SYNJ2BP-COX16A0A087WUM0 186 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 TK2O00142 265 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 RARAP10276 462 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 BSPRYQ5W0U4 402 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 REXO4Q9GZR2 422 aaKnown RBP9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 DMTF1Q9Y222 760 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 TIAM1Q13009 1591 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 ANKRD34BA5PLL1 514 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 MTSS1O43312 755 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 TMEM127O75204 238 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 TCN1P20061 433 aaPredicted RBP9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 ENTPD1P49961 510 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 EPM2AIP1Q7L775 607 aaPredicted RBP9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 ANKRD13BQ86YJ7 626 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 CATSPER1Q8NEC5 780 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 PYDC1Q8WXC3 89 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 ST8SIA2Q92186 375 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 TBC1D10AQ9BXI6 508 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 CARD14Q9BXL6 1004 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 KIAA1683Q9H0B3 1180 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 STRN4Q9NRL3 753 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 TYW1Q9NV66 732 aaKnown RBP9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 GPRC5DQ9NZD1 345 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 PKD2L2Q9NZM6 624 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 MARCOQ9UEW3 520 aaPredicted RBP9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 AMOTL2Q9Y2J4 779 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 SAT1P21673 171 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 KCNA5P22460 613 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 NT5C2P49902 561 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 ALDH18A1P54886 795 aaKnown RBP9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 NCKAP1LP55160 1127 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 HIC1Q14526 733 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 TAF5Q15542 800 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 AGBL2Q5U5Z8 902 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 BNIPLQ7Z465 357 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 RELL1Q8IUW5 271 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 PYROXD1Q8WU10 500 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 RNF25Q96BH1 459 aaPredicted RBP9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 BPIFA3Q9BQP9 254 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 TIPINQ9BVW5 301 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 ELOVL6Q9H5J4 265 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 INIPQ9NRY2 104 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 AMFRQ9UKV5 643 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 FLT1P17948 1338 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 ASAP2O43150 1006 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 CCNKO75909 580 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 PIK3CBP42338 1070 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 RAB14P61106 215 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 MFSD6Q6ZSS7 791 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 ZCCHC7Q8N3Z6 543 aaKnown RBP9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 LRRC71Q8N4P6 559 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 GOT1L1Q8NHS2 421 aaPredicted RBP9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 LRP2BPQ9P2M1 347 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 ZBED4O75132 1171 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 RNASEH2AO75792 299 aaKnown RBP9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 ASNSP08243 561 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 PLOD1Q02809 727 aaPredicted RBP9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 KRT17Q04695 432 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 COX10Q12887 443 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 SLC9A4Q6AI14 798 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 CELF4Q9BZC1 486 aaKnown RBP9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 TRIM45Q9H8W5 580 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms