RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 IPCEF1Q8WWN9 437 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-208ENST00000553278 TNPO1Q92973 898 aaKnown RBP6.76□□□□□ -1.33
SCFD1-208ENST00000553278 ZNF518BQ9C0D4 1074 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 ADAM7Q9H2U9 754 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 LDAHQ9H6V9 325 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 TLR9Q9NR96 1032 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 SIDT1Q9NXL6 827 aaKnown RBP6.76□□□□□ -1.33
SCFD1-208ENST00000553278 Q9UFV3 132 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 SRRDQ9UH36 339 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 AJAP1Q9UKB5 411 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-208ENST00000553278 MED16Q9Y2X0 877 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.76□□□□□ -1.33
SCFD1-208ENST00000553278 PRSS47A8MTI9 375 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 TRIM38O00635 465 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 TGFB1P01137 390 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 GASTP01350 101 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 POLD1P28340 1107 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 ELF1P32519 619 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 KRT9P35527 623 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 WNT3AP56704 352 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 EXOSC9Q06265 439 aaKnown RBP6.75□□□□□ -1.33
SCFD1-208ENST00000553278 ADGRF1Q5T601 910 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 TMEM200BQ69YZ2 307 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 JMJD6Q6NYC1 403 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-208ENST00000553278 CFAP161Q6P656 301 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 INTS5Q6P9B9 1019 aaKnown RBP6.75□□□□□ -1.33
SCFD1-208ENST00000553278 STPG3Q8N7X2 389 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 CCDC150Q8NCX0 1101 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 PIK3C3Q8NEB9 887 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 SNRNP27Q8WVK2 155 aaKnown RBP6.75□□□□□ -1.33
SCFD1-208ENST00000553278 CPA5Q8WXQ8 436 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 HDAC2Q92769 488 aaKnown RBP6.75□□□□□ -1.33
SCFD1-208ENST00000553278 CNPPD1Q9BV87 410 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 C1orf43Q9BWL3 253 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 C19orf73Q9NVV2 129 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 IFT80Q9P2H3 777 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-208ENST00000553278 TRPS1Q9UHF7 1281 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 ZDHHC8Q9ULC8 765 aa6.75□□□□□ -1.33
SCFD1-208ENST00000553278 YBX2Q9Y2T7 364 aaKnown RBP6.75□□□□□ -1.33
SCFD1-208ENST00000553278 ABLIM1O14639 778 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 TEX33O43247 280 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 ADCY6O43306 1168 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 CD1AP06126 327 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 GNAI3P08754 354 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 IL2RBP14784 551 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 XBP1P17861 261 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 HDCP19113 662 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 ADCY8P40145 1251 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 CARSP49589 748 aaKnown RBP6.74□□□□□ -1.33
SCFD1-208ENST00000553278 GNAI1P63096 354 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 ATP8B2P98198 1209 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 MTM1Q13496 603 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 FBXO47Q5MNV8 452 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 VPS53Q5VIR6 699 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 TTLL5Q6EMB2 1281 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 UNC13DQ70J99 1090 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 VSIG10LQ86VR7 867 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 SUGP1Q8IWZ8 645 aaKnown RBP6.74□□□□□ -1.33
SCFD1-208ENST00000553278 ADGRG2Q8IZP9 1017 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 FAM71BQ8TC56 605 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 CASKIN2Q8WXE0 1202 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 MAML1Q92585 1016 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 RUBCNQ92622 972 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 NKD2Q969F2 451 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-208ENST00000553278 WRNIP1Q96S55 665 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 MAGEB5Q9BZ81 275 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 SMURF2Q9HAU4 748 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 WASH6PQ9NQA3 447 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 NECTIN3Q9NQS3 549 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 KCND1Q9NSA2 647 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 SPATA6Q9NWH7 488 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-208ENST00000553278 GPRC5DQ9NZD1 345 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 KLHL14Q9P2G3 628 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 SLC13A4Q9UKG4 626 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 ITGB1BP2Q9UKP3 347 aa6.74□□□□□ -1.33
SCFD1-208ENST00000553278 FAM234BA2RU67 622 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 AQP12BA6NM10 295 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 hCG_1984214I3L0E3 225 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 IPO5O00410 1097 aaKnown RBP6.73□□□□□ -1.33
SCFD1-208ENST00000553278 PRNPP04156 253 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 IFIT1P09914 478 aaKnown RBP6.73□□□□□ -1.33
SCFD1-208ENST00000553278 IDEP14735 1019 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 CNTFP26441 200 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 GUCY1A2P33402 732 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 AFMP43652 599 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 CACNB2Q08289 660 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-208ENST00000553278 RAB30Q15771 203 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 TIGD6Q17RP2 521 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 ADCK5Q3MIX3 580 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 ANKRD45Q5TZF3 282 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 OLFML2BQ68BL8 750 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 LMBRD2Q68DH5 695 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-208ENST00000553278 WFDC3Q8IUB2 231 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 BCL6BQ8N143 479 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-208ENST00000553278 ESX1Q8N693 406 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 C1orf131Q8NDD1 294 aaKnown RBP6.73□□□□□ -1.33
SCFD1-208ENST00000553278 FLCNQ8NFG4 579 aa6.73□□□□□ -1.33
SCFD1-208ENST00000553278 IPO4Q8TEX9 1081 aaKnown RBP6.73□□□□□ -1.33
SCFD1-208ENST00000553278 GFM2Q969S9 779 aaKnown RBP6.73□□□□□ -1.33
SCFD1-208ENST00000553278 LRRC46Q96FV0 321 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms