RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 DPYDQ12882 1025 aa20.06■□□□□ 0.8
PRPF40B-216ENST00000552301 BMT2Q1RMZ1 405 aa20.06■□□□□ 0.8
PRPF40B-216ENST00000552301 JADE1Q6IE81 842 aa20.06■□□□□ 0.8
PRPF40B-216ENST00000552301 TAS1R1Q7RTX1 841 aa20.06■□□□□ 0.8
PRPF40B-216ENST00000552301 BRSK2Q8IWQ3 736 aa20.06■□□□□ 0.8
PRPF40B-216ENST00000552301 GPD1LQ8N335 351 aa20.06■□□□□ 0.8
PRPF40B-216ENST00000552301 CASP10Q92851 521 aa20.06■□□□□ 0.8
PRPF40B-216ENST00000552301 B3GALT6Q96L58 329 aa20.06■□□□□ 0.8
PRPF40B-216ENST00000552301 TTPALQ9BTX7 342 aa20.06■□□□□ 0.8
PRPF40B-216ENST00000552301 RBAKQ9NYW8 714 aaPredicted RBP20.06■□□□□ 0.8
PRPF40B-216ENST00000552301 BARX2Q9UMQ3 279 aaPredicted RBP20.06■□□□□ 0.8
PRPF40B-216ENST00000552301 FAM50BQ9Y247 325 aa20.06■□□□□ 0.8
PRPF40B-216ENST00000552301 DERAQ9Y315 318 aa20.06■□□□□ 0.8
PRPF40B-216ENST00000552301 GOLGA8IPA6NC78 632 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 SPDYE4A6NLX3 237 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 GOLGA8JA6NMD2 632 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 EFEMP2O95967 443 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 ADRB2P07550 413 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 NFICP08651 508 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 MCM4P33991 863 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 KCNQ1P51787 676 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 SNRPFP62306 86 aaKnown RBP20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 STK4Q13043 487 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 CLUL1Q15846 466 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 KNOP1Q1ED39 458 aaKnown RBP20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 PUS10Q3MIT2 529 aaKnown RBP20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 PDXDC1Q6P996 788 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 GPR65Q8IYL9 337 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 GOLGA5Q8TBA6 731 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 KLHL5Q96PQ7 755 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 AGPAT3Q9NRZ7 376 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 CHST7Q9NS84 486 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 HSPBP1Q9NZL4 362 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 CGNQ9P2M7 1197 aaKnown RBP20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 CD207Q9UJ71 328 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 C2CD2Q9Y426 696 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 HCFC2Q9Y5Z7 792 aa20.05■□□□□ 0.8
PRPF40B-216ENST00000552301 PRUNE2Q8WUY3 3088 aa20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 GLP2RO95838 553 aa20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 CNPP09543 421 aaKnown RBP20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 LRPAP1P30533 357 aa20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 HOXD13P35453 343 aa20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 LTBRP36941 435 aa20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 DLX2Q07687 328 aaPredicted RBP20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 KIAA0319Q5VV43 1072 aa20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 CRELD2Q6UXH1 353 aaPredicted RBP20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 KIAA0895Q8NCT3 520 aa20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 C3orf58Q8NDZ4 430 aa20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 TIGD1Q96MW7 591 aa20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 KIAA1586Q9HCI6 787 aa20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 RMND1Q9NWS8 449 aa20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 CUL9Q8IWT3 2517 aa20.04■□□□□ 0.8
PRPF40B-216ENST00000552301 ZNF233A6NK53 670 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 LILRB3O75022 631 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 RHOBTB3O94955 611 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 SMC2O95347 1197 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 BRCC3P46736 316 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 CYP2J2P51589 502 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 GUCY2FP51841 1108 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 RBM10P98175 930 aaKnown RBP20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 PNOCQ13519 176 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 SNW1Q13573 536 aaKnown RBP20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 KCNB1Q14721 858 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 ZBTB6Q15916 424 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 PSMD5Q16401 504 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 RTP2Q5QGT7 225 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 SPATA1Q5VX52 437 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 PTCRAQ6ISU1 281 aaPredicted RBP20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 ELMSAN1Q6PJG2 1045 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 NT5DC4Q86YG4 428 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 ENGASEQ8NFI3 743 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 VN1R2Q8NFZ6 395 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 IPO9Q96P70 1041 aaKnown RBP20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 DZANK1Q9NVP4 752 aa20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 SPTBN5Q9NRC6 3674 aaKnown RBP20.03■□□□□ 0.8
PRPF40B-216ENST00000552301 I3L4J1 428 aa20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 CLIC2O15247 247 aa20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 TEX28O15482 410 aa20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 TGFB1I1O43294 461 aa20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 TFAMQ00059 246 aaKnown RBP20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 SMAD4Q13485 552 aaKnown RBP20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 SURF1Q15526 300 aa20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 ANKRD54Q6NXT1 300 aa20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 PRSS55Q6UWB4 352 aaPredicted RBP20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 TMEM184AQ6ZMB5 413 aa20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 ZSWIM2Q8NEG5 633 aa20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 PIK3R5Q8WYR1 880 aa20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 RXFP1Q9HBX9 757 aa20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 CLEC1BQ9P126 229 aa20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 ANK1P16157 1881 aa20.02■□□□□ 0.8
PRPF40B-216ENST00000552301 SYN3O14994 580 aa20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 GADD45BO75293 160 aaPredicted RBP20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 GLUD1P00367 558 aa20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 HOXB8P17481 243 aaPredicted RBP20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 FGFR3P22607 806 aa20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 TKTP29401 623 aaKnown RBP20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 UBE2HP62256 183 aa20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 CBWD2Q8IUF1 395 aa20.01■□□□□ 0.79
PRPF40B-216ENST00000552301 GLYCTKQ8IVS8 523 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms