RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 NFXL1Q6ZNB6 911 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 MIGA2Q7L4E1 593 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 PHYKPLQ8IUZ5 450 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 RBM12BQ8IXT5 1001 aaKnown RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 RAVER1Q8IY67 606 aaKnown RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 MYO1HQ8N1T3 1032 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 HIPK4Q8NE63 616 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 TRIB2Q92519 343 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 ERCC4Q92889 916 aaPredicted RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 E2F7Q96AV8 911 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 DDX11Q96FC9 970 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 FAXDC2Q96IV6 333 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 KIRREL1Q96J84 757 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 ACAP3Q96P50 834 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 SLC6A17Q9H1V8 727 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 TTYH1Q9H313 450 aaPredicted RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 BICC1Q9H694 974 aaKnown RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 RXFP1Q9HBX9 757 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 NGRNQ9NPE2 291 aaKnown RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 LUC7LQ9NQ29 371 aaKnown RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 FLRT1Q9NZU1 646 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 ZIM2Q9NZV7 527 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 RBPJLQ9UBG7 517 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 MSRAQ9UJ68 235 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 ZNF180Q9UJW8 692 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 FAN1Q9Y2M0 1017 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 YBX2Q9Y2T7 364 aaKnown RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 TELO2Q9Y4R8 837 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 LAS1LQ9Y4W2 734 aaKnown RBP2.9□□□□□ -1.95
CPSF6-207ENST00000551516 ASB1Q9Y576 335 aa2.9□□□□□ -1.95
CPSF6-207ENST00000551516 WDFY4Q6ZS81 3184 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 UBA6A0AVT1 1052 aaPredicted RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 GOLGA6CA6NDK9 693 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 GOLGA6BA6NDN3 693 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 EYA2O00167 538 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 BIN1O00499 593 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 TSPAN6O43657 245 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 CIAO1O76071 339 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 DDX58O95786 925 aaKnown RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ENO2P09104 434 aaPredicted RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 HOXC6P09630 235 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 GOLGA6DP0CG33 693 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ZSCAN20P17040 1043 aaPredicted RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 CAPN2P17655 700 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 VCAM1P19320 739 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ITGB7P26010 798 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ADORA1P30542 326 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 NF2P35240 595 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 MAGEA10P43363 369 aaPredicted RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 PHKA1P46020 1223 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 MAPKAPK2P49137 400 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 EPHB4P54760 987 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 PRR5P85299 388 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 PIN1Q13526 163 aaPredicted RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 TNFAIP1Q13829 316 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 LRP8Q14114 963 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 CLUL1Q15846 466 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 FAM110CQ1W6H9 321 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 LRRC26Q2I0M4 334 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 INAVAQ3KP66 663 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 KIAA1755Q5JYT7 1200 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 TTC38Q5R3I4 469 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ZMYM1Q5SVZ6 1142 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 CCSAPQ6IQ19 270 aaPredicted RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 FSTL4Q6MZW2 842 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 RPTNQ6XPR3 784 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ESPNLQ6ZVH7 1005 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ZNF804AQ7Z570 1209 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ADGRA1Q86SQ6 560 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ATG4DQ86TL0 474 aaPredicted RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 SCYL3Q8IZE3 742 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 C7orf31Q8N865 590 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ARRDC4Q8NCT1 418 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 C1orf162Q8NEQ5 155 aaPredicted RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 LMBR1Q8WVP7 490 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ARAP2Q8WZ64 1704 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ALG3Q92685 438 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 TSPAN17Q96FV3 270 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 TOE1Q96GM8 510 aaKnown RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 INTS4Q96HW7 963 aaKnown RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 PAWRQ96IZ0 340 aaKnown RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 C16orf92Q96LL3 132 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 C8orf48Q96LL4 319 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 GBP4Q96PP9 640 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 TUBGCP5Q96RT8 1024 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 WRNIP1Q96S55 665 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 MPHOSPH8Q99549 860 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 SLC13A1Q9BZW2 595 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 RNF32Q9H0A6 362 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 CDH19Q9H159 772 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 TMX4Q9H1E5 349 aaPredicted RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ZMAT4Q9H898 229 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 TOPORSQ9NS56 1045 aaPredicted RBP2.89□□□□□ -1.95
CPSF6-207ENST00000551516 GOLGA6AQ9NYA3 693 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 DTLQ9NZJ0 730 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ARHGAP28Q9P2N2 729 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 IP6K2Q9UHH9 426 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 AGTPBP1Q9UPW5 1226 aa2.89□□□□□ -1.95
CPSF6-207ENST00000551516 ANKRD6Q9Y2G4 727 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms