RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 TIPINQ9BVW5 301 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.98■□□□□ 0.15
PDE1B-207ENST00000550620 CYP39A1Q9NYL5 469 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 EXOC7Q9UPT5 735 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 MRPL11Q9Y3B7 192 aaKnown RBP15.98■□□□□ 0.15
PDE1B-207ENST00000550620 LRRC37AA6NMS7 1700 aa15.98■□□□□ 0.15
PDE1B-207ENST00000550620 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.97■□□□□ 0.15
PDE1B-207ENST00000550620 EXOC1LA0A1B0GW35 172 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 GYS1P13807 737 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 GNAZP19086 355 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 RRM1P23921 792 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 MAGEA4P43358 317 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 WDR4P57081 412 aaKnown RBP15.97■□□□□ 0.15
PDE1B-207ENST00000550620 TNIP1Q15025 636 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 CDCA2Q69YH5 1023 aaPredicted RBP15.97■□□□□ 0.15
PDE1B-207ENST00000550620 SEPT14Q6ZU15 432 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 ENOSF1Q7L5Y1 443 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 TDRPQ86YL5 185 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 LARGE2Q8N3Y3 721 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 ZCCHC9Q8N567 271 aaKnown RBP15.97■□□□□ 0.15
PDE1B-207ENST00000550620 SEMA4DQ92854 862 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 DDX27Q96GQ7 796 aaKnown RBP15.97■□□□□ 0.15
PDE1B-207ENST00000550620 C9orf72Q96LT7 481 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 MRIQ9BWK5 157 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 FAM198AQ9UFP1 575 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 RPL26L1Q9UNX3 145 aaKnown RBP15.97■□□□□ 0.15
PDE1B-207ENST00000550620 ATRNL1Q5VV63 1379 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 KLRG2A4D1S0 409 aaPredicted RBP15.97■□□□□ 0.15
PDE1B-207ENST00000550620 PSTPIP1O43586 416 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 TOM1O60784 492 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 ADRB2P07550 413 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 MOGSQ13724 837 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 SNRNP35Q16560 246 aaKnown RBP15.97■□□□□ 0.15
PDE1B-207ENST00000550620 CMPK2Q5EBM0 449 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 SH3BP5LQ7L8J4 393 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 TRABD2AQ86V40 505 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 MCOLN2Q8IZK6 566 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 FBXL13Q8NEE6 735 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 SH3TC2Q8TF17 1288 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 STK32AQ8WU08 396 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 RBM15Q96T37 977 aaKnown RBP eCLIP15.97■□□□□ 0.15
PDE1B-207ENST00000550620 PPCSQ9HAB8 311 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 CHKBQ9Y259 395 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 LRRC42Q9Y546 428 aa15.97■□□□□ 0.15
PDE1B-207ENST00000550620 MROH7Q68CQ1 1323 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 GRIN3BO60391 1043 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 HNRNPCL1O60812 293 aaKnown RBP15.96■□□□□ 0.15
PDE1B-207ENST00000550620 GH2P01242 217 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 RALAP11233 206 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 TARSP26639 723 aaKnown RBP15.96■□□□□ 0.15
PDE1B-207ENST00000550620 CCNHP51946 323 aaPredicted RBP15.96■□□□□ 0.15
PDE1B-207ENST00000550620 DNAJC3Q13217 504 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 KLF1Q13351 362 aaPredicted RBP15.96■□□□□ 0.15
PDE1B-207ENST00000550620 WASHC2DQ5SRD0 308 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 TMEM63BQ5T3F8 832 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 NAIF1Q69YI7 327 aaPredicted RBP15.96■□□□□ 0.15
PDE1B-207ENST00000550620 GSTA5Q7RTV2 222 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 ZNF677Q86XU0 584 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 LMNTD2Q8IXW0 634 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 KCNV2Q8TDN2 545 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 LRRC8CQ8TDW0 803 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 PWWP2AQ96N64 755 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 SMC6Q96SB8 1091 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 RAB20Q9NX57 234 aa15.96■□□□□ 0.15
PDE1B-207ENST00000550620 R3HDM2Q9Y2K5 976 aaKnown RBP15.96■□□□□ 0.15
PDE1B-207ENST00000550620 GOLGA8IPA6NC78 632 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 GOLGA8JA6NMD2 632 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 LMNAP02545 664 aaKnown RBP15.96■□□□□ 0.14
PDE1B-207ENST00000550620 KRT5P13647 590 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 GTF2H1P32780 548 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 CETN2P41208 172 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 RBM5P52756 815 aaKnown RBP eCLIP15.96■□□□□ 0.14
PDE1B-207ENST00000550620 VPS72Q15906 364 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 PDK4Q16654 411 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 CYP4F22Q6NT55 531 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 CCDC174Q6PII3 467 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 RHOT1Q8IXI2 618 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.96■□□□□ 0.14
PDE1B-207ENST00000550620 CCDC127Q96BQ5 260 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 MXRA8Q9BRK3 442 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 HERPUD2Q9BSE4 406 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 OSBPL1AQ9BXW6 950 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 SPATS2LQ9NUQ6 558 aaKnown RBP15.96■□□□□ 0.14
PDE1B-207ENST00000550620 ZFATQ9P243 1243 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 HAO1Q9UJM8 370 aa15.96■□□□□ 0.14
PDE1B-207ENST00000550620 DDX39AO00148 427 aaKnown RBP15.95■□□□□ 0.14
PDE1B-207ENST00000550620 ABLIM1O14639 778 aa15.95■□□□□ 0.14
PDE1B-207ENST00000550620 EDF1O60869 148 aaKnown RBP15.95■□□□□ 0.14
PDE1B-207ENST00000550620 PEX11AO75192 247 aa15.95■□□□□ 0.14
PDE1B-207ENST00000550620 PROSCO94903 275 aa15.95■□□□□ 0.14
PDE1B-207ENST00000550620 UNGP13051 313 aaPredicted RBP15.95■□□□□ 0.14
PDE1B-207ENST00000550620 RARRES1P49788 294 aa15.95■□□□□ 0.14
PDE1B-207ENST00000550620 NCKAP1LP55160 1127 aa15.95■□□□□ 0.14
PDE1B-207ENST00000550620 EP400NLQ6ZTU2 488 aa15.95■□□□□ 0.14
PDE1B-207ENST00000550620 CBWD2Q8IUF1 395 aa15.95■□□□□ 0.14
PDE1B-207ENST00000550620 APLFQ8IW19 511 aaPredicted RBP15.95■□□□□ 0.14
PDE1B-207ENST00000550620 ZSWIM2Q8NEG5 633 aa15.95■□□□□ 0.14
PDE1B-207ENST00000550620 TMC2Q8TDI7 906 aa15.95■□□□□ 0.14
PDE1B-207ENST00000550620 DENND1AQ8TEH3 1009 aa15.95■□□□□ 0.14
PDE1B-207ENST00000550620 PARD3BQ8TEW8 1205 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms