RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TRIM49CP0CI26 452 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 DLATP10515 647 aaKnown RBP14.12□□□□□ -0.15
RAB5C-206ENST00000550406 EPB41P11171 864 aaKnown RBP14.12□□□□□ -0.15
RAB5C-206ENST00000550406 LAG3P18627 525 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 LRPAP1P30533 357 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 VAMP7P51809 220 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 TFAMQ00059 246 aaKnown RBP14.12□□□□□ -0.15
RAB5C-206ENST00000550406 BFSP1Q12934 665 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 UPP1Q16831 310 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 SPOUT1Q5T280 376 aaKnown RBP14.12□□□□□ -0.15
RAB5C-206ENST00000550406 PPP2R2DQ66LE6 453 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 FRMD5Q7Z6J6 570 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 NT5DC4Q86YG4 428 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 WDR49Q8IV35 697 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 DHX40Q8IX18 779 aaKnown RBP14.12□□□□□ -0.15
RAB5C-206ENST00000550406 ZNF558Q96NG5 402 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 TGS1Q96RS0 853 aaKnown RBP14.12□□□□□ -0.15
RAB5C-206ENST00000550406 VN1R3Q9BXE9 311 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 MTMR12Q9C0I1 747 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 HSD3B7Q9H2F3 369 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 SLC28A3Q9HAS3 691 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 SAMSN1Q9NSI8 373 aaKnown RBP14.12□□□□□ -0.15
RAB5C-206ENST00000550406 SLC38A7Q9NVC3 462 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 DPP3Q9NY33 737 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 SIX4Q9UIU6 781 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 MTUS1Q9ULD2 1270 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 FAN1Q9Y2M0 1017 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 LAMA3Q16787 3333 aa14.12□□□□□ -0.15
RAB5C-206ENST00000550406 RFXAPO00287 272 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 TULP1O00294 542 aaPredicted RBP14.11□□□□□ -0.15
RAB5C-206ENST00000550406 PIRO00625 290 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 TNNI1P19237 187 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 RPL9P32969 192 aaKnown RBP14.11□□□□□ -0.15
RAB5C-206ENST00000550406 CTNNB1P35222 781 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 OR1G1P47890 313 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 MARSP56192 900 aaKnown RBP14.11□□□□□ -0.15
RAB5C-206ENST00000550406 ENPEPQ07075 957 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 PPP3CAQ08209 521 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 HSP90AA2PQ14568 343 aaPredicted RBP14.11□□□□□ -0.15
RAB5C-206ENST00000550406 IQCB1Q15051 598 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 C15orf39Q6ZRI6 1047 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 INTS8Q75QN2 995 aaKnown RBP14.11□□□□□ -0.15
RAB5C-206ENST00000550406 C1orf127Q8N9H9 656 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 KLHL23Q8NBE8 558 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 BEST2Q8NFU1 509 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 IGSF21Q96ID5 467 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 FNBP1Q96RU3 617 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 BPIFA3Q9BQP9 254 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 THAP9Q9H5L6 903 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 ZNF576Q9H609 170 aa14.11□□□□□ -0.15
RAB5C-206ENST00000550406 PRG3Q9Y2Y8 225 aaPredicted RBP14.11□□□□□ -0.15
RAB5C-206ENST00000550406 PODXLO00592 558 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 IKBKBO14920 756 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 KIF4AO95239 1232 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 CST3P01034 146 aaPredicted RBP14.1□□□□□ -0.15
RAB5C-206ENST00000550406 RB1P06400 928 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 KRT13P13646 458 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 ALDH7A1P49419 539 aaKnown RBP14.1□□□□□ -0.15
RAB5C-206ENST00000550406 DUOXA2Q1HG44 320 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 CCDC40Q4G0X9 1142 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 HSP90AA4PQ58FG1 418 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 CDKAL1Q5VV42 579 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 TDRD10Q5VZ19 366 aaKnown RBP14.1□□□□□ -0.15
RAB5C-206ENST00000550406 C9orf57Q5W0N0 161 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 DCLRE1AQ6PJP8 1040 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 LRSAM1Q6UWE0 723 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 TAS1R1Q7RTX1 841 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 TRAPPC11Q7Z392 1133 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 TRIM59Q8IWR1 403 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 AOPEPQ8N6M6 819 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 SPPL3Q8TCT6 385 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 CACTINQ8WUQ7 758 aaKnown RBP14.1□□□□□ -0.15
RAB5C-206ENST00000550406 SLC35C1Q96A29 364 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 DDX27Q96GQ7 796 aaKnown RBP14.1□□□□□ -0.15
RAB5C-206ENST00000550406 UROC1Q96N76 676 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 SAMD11Q96NU1 681 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 PLVAPQ9BX97 442 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 AAASQ9NRG9 546 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 FANCLQ9NW38 375 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 SPG21Q9NZD8 308 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 ARMCX3Q9UH62 379 aaPredicted RBP14.1□□□□□ -0.15
RAB5C-206ENST00000550406 NFE2L3Q9Y4A8 694 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 PCDHB12Q9Y5F1 795 aa14.1□□□□□ -0.15
RAB5C-206ENST00000550406 TSC2P49815 1807 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 H3BNC9 293 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 TMEM189-UBE2V1I3L0A0 370 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 SPTLC1O15269 473 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 GRM6O15303 877 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 XPOTO43592 962 aaKnown RBP14.09□□□□□ -0.15
RAB5C-206ENST00000550406 LPXNO60711 386 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 LRRN2O75325 713 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 FGF18O76093 207 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 VNN1O95497 513 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 FGFR1OPO95684 399 aaKnown RBP14.09□□□□□ -0.15
RAB5C-206ENST00000550406 GNA14O95837 355 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 ITGB3P05106 788 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 DNAJB1P25685 340 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 BRCC3P46736 316 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 GCLMP48507 274 aa14.09□□□□□ -0.15
RAB5C-206ENST00000550406 ZNF165P49910 485 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms