RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 CBWD1Q9BRT8 395 aa28.18■■■□□ 2.1
CPSF6-205ENST00000550075 TTPALQ9BTX7 342 aa28.18■■■□□ 2.1
CPSF6-205ENST00000550075 CGNQ9P2M7 1197 aaKnown RBP28.18■■■□□ 2.1
CPSF6-205ENST00000550075 TUBGCP4Q9UGJ1 667 aa28.18■■■□□ 2.1
CPSF6-205ENST00000550075 CD207Q9UJ71 328 aa28.18■■■□□ 2.1
CPSF6-205ENST00000550075 HOOK1Q9UJC3 728 aaKnown RBP28.18■■■□□ 2.1
CPSF6-205ENST00000550075 ANK1P16157 1881 aa28.18■■■□□ 2.1
CPSF6-205ENST00000550075 KIF20AO95235 890 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 KLRC2P26717 231 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 KCNQ1P51787 676 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 SPAG1Q07617 926 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 DPYDQ12882 1025 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 KIAA0319Q5VV43 1072 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 JADE1Q6IE81 842 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 TMEM184AQ6ZMB5 413 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 BRSK2Q8IWQ3 736 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 NELFCDQ8IXH7 590 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 GPD1LQ8N335 351 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 GOLGA5Q8TBA6 731 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 NOC3LQ8WTT2 800 aaKnown RBP28.17■■■□□ 2.1
CPSF6-205ENST00000550075 RIN2Q8WYP3 895 aaPredicted RBP28.17■■■□□ 2.1
CPSF6-205ENST00000550075 DZANK1Q9NVP4 752 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 BARX2Q9UMQ3 279 aaPredicted RBP28.17■■■□□ 2.1
CPSF6-205ENST00000550075 C2CD2Q9Y426 696 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 HCFC2Q9Y5Z7 792 aa28.17■■■□□ 2.1
CPSF6-205ENST00000550075 LILRB3O75022 631 aa28.16■■■□□ 2.1
CPSF6-205ENST00000550075 CNPP09543 421 aaKnown RBP28.16■■■□□ 2.1
CPSF6-205ENST00000550075 PRR29P0C7W0 189 aa28.16■■■□□ 2.1
CPSF6-205ENST00000550075 LRPAP1P30533 357 aa28.16■■■□□ 2.1
CPSF6-205ENST00000550075 DLX2Q07687 328 aaPredicted RBP28.16■■■□□ 2.1
CPSF6-205ENST00000550075 ZBTB6Q15916 424 aa28.16■■■□□ 2.1
CPSF6-205ENST00000550075 ELMSAN1Q6PJG2 1045 aa28.16■■■□□ 2.1
CPSF6-205ENST00000550075 NT5DC4Q86YG4 428 aa28.16■■■□□ 2.1
CPSF6-205ENST00000550075 KLHL5Q96PQ7 755 aa28.16■■■□□ 2.1
CPSF6-205ENST00000550075 PCIF1Q9H4Z3 704 aa28.16■■■□□ 2.1
CPSF6-205ENST00000550075 RXFP1Q9HBX9 757 aa28.16■■■□□ 2.1
CPSF6-205ENST00000550075 KIAA1586Q9HCI6 787 aa28.16■■■□□ 2.1
CPSF6-205ENST00000550075 RBAKQ9NYW8 714 aaPredicted RBP28.16■■■□□ 2.1
CPSF6-205ENST00000550075 HOXD13P35453 343 aa28.15■■■□□ 2.1
CPSF6-205ENST00000550075 SMAD4Q13485 552 aaKnown RBP28.15■■■□□ 2.1
CPSF6-205ENST00000550075 KNOP1Q1ED39 458 aaKnown RBP28.15■■■□□ 2.1
CPSF6-205ENST00000550075 SPATA1Q5VX52 437 aa28.15■■■□□ 2.1
CPSF6-205ENST00000550075 PTCRAQ6ISU1 281 aaPredicted RBP28.15■■■□□ 2.1
CPSF6-205ENST00000550075 CRELD2Q6UXH1 353 aaPredicted RBP28.15■■■□□ 2.1
CPSF6-205ENST00000550075 CEP57Q86XR8 500 aa28.15■■■□□ 2.1
CPSF6-205ENST00000550075 C3orf58Q8NDZ4 430 aa28.15■■■□□ 2.1
CPSF6-205ENST00000550075 VN1R2Q8NFZ6 395 aa28.15■■■□□ 2.1
CPSF6-205ENST00000550075 PIK3R5Q8WYR1 880 aa28.15■■■□□ 2.1
CPSF6-205ENST00000550075 MSLNLQ96KJ4 702 aa28.15■■■□□ 2.1
CPSF6-205ENST00000550075 B3GALT6Q96L58 329 aa28.15■■■□□ 2.1
CPSF6-205ENST00000550075 AGPAT3Q9NRZ7 376 aa28.15■■■□□ 2.1
CPSF6-205ENST00000550075 CLEC1BQ9P126 229 aa28.15■■■□□ 2.1
CPSF6-205ENST00000550075 FNIP2Q9P278 1114 aa28.15■■■□□ 2.1
CPSF6-205ENST00000550075 KINO60870 393 aaKnown RBP28.14■■■□□ 2.1
CPSF6-205ENST00000550075 RHOBTB3O94955 611 aa28.14■■■□□ 2.1
CPSF6-205ENST00000550075 NFICP08651 508 aa28.14■■■□□ 2.1
CPSF6-205ENST00000550075 HOXB8P17481 243 aaPredicted RBP28.14■■■□□ 2.1
CPSF6-205ENST00000550075 STK4Q13043 487 aa28.14■■■□□ 2.1
CPSF6-205ENST00000550075 KCNC3Q14003 757 aa28.14■■■□□ 2.1
CPSF6-205ENST00000550075 KCNB1Q14721 858 aa28.14■■■□□ 2.1
CPSF6-205ENST00000550075 CLUL1Q15846 466 aa28.14■■■□□ 2.1
CPSF6-205ENST00000550075 RTP2Q5QGT7 225 aa28.14■■■□□ 2.1
CPSF6-205ENST00000550075 KIAA0895Q8NCT3 520 aa28.14■■■□□ 2.1
CPSF6-205ENST00000550075 ENGASEQ8NFI3 743 aa28.14■■■□□ 2.1
CPSF6-205ENST00000550075 TIGD1Q96MW7 591 aa28.14■■■□□ 2.1
CPSF6-205ENST00000550075 HSPBP1Q9NZL4 362 aa28.14■■■□□ 2.1
CPSF6-205ENST00000550075 DPP7Q9UHL4 492 aa28.14■■■□□ 2.1
CPSF6-205ENST00000550075 GOLGA8IPA6NC78 632 aa28.13■■■□□ 2.09
CPSF6-205ENST00000550075 GOLGA8JA6NMD2 632 aa28.13■■■□□ 2.09
CPSF6-205ENST00000550075 FGFR3P22607 806 aa28.13■■■□□ 2.09
CPSF6-205ENST00000550075 MCM4P33991 863 aa28.13■■■□□ 2.09
CPSF6-205ENST00000550075 PSMD5Q16401 504 aa28.13■■■□□ 2.09
CPSF6-205ENST00000550075 ANKRD54Q6NXT1 300 aa28.13■■■□□ 2.09
CPSF6-205ENST00000550075 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.13■■■□□ 2.09
CPSF6-205ENST00000550075 RMND1Q9NWS8 449 aa28.13■■■□□ 2.09
CPSF6-205ENST00000550075 VWA8A3KMH1 1905 aa28.12■■■□□ 2.09
CPSF6-205ENST00000550075 ZNF233A6NK53 670 aa28.12■■■□□ 2.09
CPSF6-205ENST00000550075 SPDYE4A6NLX3 237 aa28.12■■■□□ 2.09
CPSF6-205ENST00000550075 TEX28O15482 410 aa28.12■■■□□ 2.09
CPSF6-205ENST00000550075 TGFB1I1O43294 461 aa28.12■■■□□ 2.09
CPSF6-205ENST00000550075 SMC2O95347 1197 aa28.12■■■□□ 2.09
CPSF6-205ENST00000550075 BMP1P13497 986 aa28.12■■■□□ 2.09
CPSF6-205ENST00000550075 PAX3P23760 479 aa28.12■■■□□ 2.09
CPSF6-205ENST00000550075 BRCC3P46736 316 aa28.12■■■□□ 2.09
CPSF6-205ENST00000550075 RBM10P98175 930 aaKnown RBP28.12■■■□□ 2.09
CPSF6-205ENST00000550075 SNW1Q13573 536 aaKnown RBP28.12■■■□□ 2.09
CPSF6-205ENST00000550075 SURF1Q15526 300 aa28.12■■■□□ 2.09
CPSF6-205ENST00000550075 SMRP1Q8NCR6 262 aa28.12■■■□□ 2.09
CPSF6-205ENST00000550075 SPTBN5Q9NRC6 3674 aaKnown RBP28.12■■■□□ 2.09
CPSF6-205ENST00000550075 GRXCR2A6NFK2 248 aa28.11■■■□□ 2.09
CPSF6-205ENST00000550075 TULP1O00294 542 aaPredicted RBP28.11■■■□□ 2.09
CPSF6-205ENST00000550075 SYN3O14994 580 aa28.11■■■□□ 2.09
CPSF6-205ENST00000550075 GLUD1P00367 558 aa28.11■■■□□ 2.09
CPSF6-205ENST00000550075 C1RP00736 705 aa28.11■■■□□ 2.09
CPSF6-205ENST00000550075 CLCN4P51793 760 aa28.11■■■□□ 2.09
CPSF6-205ENST00000550075 ANKS3Q6ZW76 656 aa28.11■■■□□ 2.09
CPSF6-205ENST00000550075 C12orf56Q8IXR9 622 aa28.11■■■□□ 2.09
CPSF6-205ENST00000550075 ADAMTS19Q8TE59 1207 aa28.11■■■□□ 2.09
CPSF6-205ENST00000550075 SLC22A17Q8WUG5 538 aa28.11■■■□□ 2.09
CPSF6-205ENST00000550075 SUSD3Q96L08 255 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms