RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 DGKDQ16760 1214 aa12.83□□□□□ -0.36
CCDC38-202ENST00000546386 KCNV1Q6PIU1 500 aa12.83□□□□□ -0.36
CCDC38-202ENST00000546386 LRRC57Q8N9N7 239 aa12.83□□□□□ -0.36
CCDC38-202ENST00000546386 RIN2Q8WYP3 895 aaPredicted RBP12.83□□□□□ -0.36
CCDC38-202ENST00000546386 ALG3Q92685 438 aa12.83□□□□□ -0.36
CCDC38-202ENST00000546386 FAM167AQ96KS9 214 aa12.83□□□□□ -0.36
CCDC38-202ENST00000546386 GOLGA2P5Q9HBQ8 144 aa12.83□□□□□ -0.36
CCDC38-202ENST00000546386 USTQ9Y2C2 406 aa12.83□□□□□ -0.36
CCDC38-202ENST00000546386 PLXNA1Q9UIW2 1896 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 IGKV6-21A0A0C4DH24 114 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 ABLIM1O14639 778 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 PPEF2O14830 753 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 RRM1P23921 792 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 TMOD1P28289 359 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 PSMC4P43686 418 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 TRPC3Q13507 836 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 MYBPC2Q14324 1141 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 DCAF12L1Q5VU92 463 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 KAT2BQ92831 832 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 NUP85Q9BW27 656 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 LUC7LQ9NQ29 371 aaKnown RBP12.82□□□□□ -0.36
CCDC38-202ENST00000546386 TSKSQ9UJT2 592 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 PLXNB2O15031 1838 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 TCRBV7S2A1N4TA0A589 114 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 ACKR2O00590 384 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 ERLIN2O94905 339 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 GLI1P08151 1106 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 SMIM10L2AP0DMW4 78 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 SMIM10L2BP0DMW5 78 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 MAP2K5Q13163 448 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 LONRF2Q1L5Z9 754 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 CYP4A22Q5TCH4 519 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 TMC2Q8TDI7 906 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 DDX1Q92499 740 aaKnown RBP12.82□□□□□ -0.36
CCDC38-202ENST00000546386 ZSWIM1Q9BR11 485 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
CCDC38-202ENST00000546386 VTA1Q9NP79 307 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 SNTG2Q9NY99 539 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 FBXL5Q9UKA1 691 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 PCDHGC5Q9Y5F6 944 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 ALG6Q9Y672 507 aa12.82□□□□□ -0.36
CCDC38-202ENST00000546386 MEIS3P2A8K0S8 358 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 OGTO15294 1046 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 HOXC6P09630 235 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 CD19P15391 556 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 GNA15P30679 374 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 MAPK4P31152 587 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 GTF2H1P32780 548 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 CUL2Q13617 745 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 SKIDA1Q1XH10 827 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 GNASQ5JWF2 1037 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 SLFN12LQ6IEE8 588 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 MPZL3Q6UWV2 235 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 SLC17A8Q8NDX2 589 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 MORC4Q8TE76 937 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 TCP11Q8WWU5 503 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 PDE4DIPQ5VU43 2346 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 LOXHD1Q8IVV2 1947 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 ZSWIM8A7E2V4 1837 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 KIF4AO95239 1232 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 NPTXRO95502 500 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 FGGP02679 453 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 AFF1P51825 1210 aaKnown RBP12.81□□□□□ -0.36
CCDC38-202ENST00000546386 CCDC142Q17RM4 750 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 C15orf39Q6ZRI6 1047 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 MMS22LQ6ZRQ5 1243 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 NT5DC3Q86UY8 548 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 RBBP8NLQ8NC74 664 aaPredicted RBP12.81□□□□□ -0.36
CCDC38-202ENST00000546386 TRPV1Q8NER1 839 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 TAF4BQ92750 862 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 C18orf25Q96B23 403 aaPredicted RBP12.81□□□□□ -0.36
CCDC38-202ENST00000546386 FZD8Q9H461 694 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 NXF3Q9H4D5 531 aaKnown RBP12.81□□□□□ -0.36
CCDC38-202ENST00000546386 PDZD7Q9H5P4 517 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 SMYD3Q9H7B4 428 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 ARFGAP3Q9NP61 516 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 CPSF3Q9UKF6 684 aaKnown RBP12.81□□□□□ -0.36
CCDC38-202ENST00000546386 COQ4Q9Y3A0 265 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 STYXL1Q9Y6J8 313 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 MGAMO43451 1857 aa12.81□□□□□ -0.36
CCDC38-202ENST00000546386 ZNF865P0CJ78 1059 aaPredicted RBP12.8□□□□□ -0.36
CCDC38-202ENST00000546386 TCF4P15884 667 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 COMTP21964 271 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 PAFAH1B1P43034 410 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 EFNA5P52803 228 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 GUCY2DQ02846 1103 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 RNF10Q8N5U6 811 aaKnown RBP12.8□□□□□ -0.36
CCDC38-202ENST00000546386 C12orf29Q8N999 325 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 C1orf127Q8N9H9 656 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 TFAP2BQ92481 460 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 CCDC94Q9BW85 323 aaPredicted RBP12.8□□□□□ -0.36
CCDC38-202ENST00000546386 TMEM134Q9H6X4 195 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 RPF1Q9H9Y2 349 aaKnown RBP12.8□□□□□ -0.36
CCDC38-202ENST00000546386 CNOT8Q9UFF9 292 aaKnown RBP12.8□□□□□ -0.36
CCDC38-202ENST00000546386 AMACRQ9UHK6 382 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 TRIP11Q15643 1979 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 ANO9A1A5B4 782 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 RRP9O43818 475 aaKnown RBP12.8□□□□□ -0.36
CCDC38-202ENST00000546386 CYP2C9P11712 490 aa12.8□□□□□ -0.36
CCDC38-202ENST00000546386 FLT3LGP49771 235 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms