RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 MYOCQ99972 504 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 VRK1Q99986 396 aaPredicted RBP3.02□□□□□ -1.93
YBX3-214ENST00000544501 SLC46A2Q9BY10 475 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 PCGF6Q9BYE7 350 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 ANLNQ9NQW6 1124 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 RLIMQ9NVW2 624 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 FBXO34Q9NWN3 711 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 JKAMPQ9P055 326 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 EIF2B4Q9UI10 523 aaKnown RBP3.02□□□□□ -1.93
YBX3-214ENST00000544501 NOB1Q9ULX3 412 aaKnown RBP3.02□□□□□ -1.93
YBX3-214ENST00000544501 SORCS3Q9UPU3 1222 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 RUVBL1Q9Y265 456 aaKnown RBP3.02□□□□□ -1.93
YBX3-214ENST00000544501 CHST2Q9Y4C5 530 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 A0A088AWK7 358 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 TCRBV7S2A1N4TA0A589 114 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 AHRRA9YTQ3 701 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 NT5C1B-RDH14C9J2C7 533 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 F2RL2O00254 374 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 LEFTY2O00292 366 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 RNASET2O00584 256 aaKnown RBP3.01□□□□□ -1.93
YBX3-214ENST00000544501 KIAA0391O15091 583 aaKnown RBP3.01□□□□□ -1.93
YBX3-214ENST00000544501 CTNND1O60716 968 aaKnown RBP3.01□□□□□ -1.93
YBX3-214ENST00000544501 SCAF4O95104 1147 aaKnown RBP3.01□□□□□ -1.93
YBX3-214ENST00000544501 PARNO95453 639 aaKnown RBP3.01□□□□□ -1.93
YBX3-214ENST00000544501 ALDH2P05091 517 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 CD1AP06126 327 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 GNAI3P08754 354 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 TYRP14679 529 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 PRDX5P30044 214 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 APOBEC3AP31941 199 aaPredicted RBP3.01□□□□□ -1.93
YBX3-214ENST00000544501 GNAI1P63096 354 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 NKX6-1P78426 367 aaPredicted RBP3.01□□□□□ -1.93
YBX3-214ENST00000544501 ZXDCQ2QGD7 858 aaPredicted RBP3.01□□□□□ -1.93
YBX3-214ENST00000544501 GFOD2Q3B7J2 385 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 FLYWCH1Q4VC44 716 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 DBX2Q6ZNG2 339 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 ZNF365Q70YC5 407 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 UBE3BQ7Z3V4 1068 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 HEATR3Q7Z4Q2 680 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 ZFPM1Q8IX07 1006 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 CAMKK1Q8N5S9 505 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 AOPEPQ8N6M6 819 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 TTC8Q8TAM2 541 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 CPT1CQ8TCG5 803 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 NUP133Q8WUM0 1156 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 CACTINQ8WUQ7 758 aaKnown RBP3.01□□□□□ -1.93
YBX3-214ENST00000544501 TSR2Q969E8 191 aaKnown RBP3.01□□□□□ -1.93
YBX3-214ENST00000544501 RAB24Q969Q5 203 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 MTFMTQ96DP5 389 aaKnown RBP3.01□□□□□ -1.93
YBX3-214ENST00000544501 LRGUKQ96M69 825 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 CGRRF1Q99675 332 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 ACO2Q99798 780 aaKnown RBP3.01□□□□□ -1.93
YBX3-214ENST00000544501 PACSIN1Q9BY11 444 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 RNPEPQ9H4A4 650 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 GSTO2Q9H4Y5 243 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 C1orf112Q9NSG2 853 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 LMBRD1Q9NUN5 540 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 PNPOQ9NVS9 261 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 CHPF2Q9P2E5 772 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 ZDHHC8Q9ULC8 765 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 ATP11BQ9Y2G3 1177 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 STXBP5LQ9Y2K9 1186 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 PCDHA3Q9Y5H8 950 aa3.01□□□□□ -1.93
YBX3-214ENST00000544501 CDHR4A6H8M9 788 aa3□□□□□ -1.93
YBX3-214ENST00000544501 LRRC14BA6NHZ5 514 aa3□□□□□ -1.93
YBX3-214ENST00000544501 FAM227AF5H4B4 570 aa3□□□□□ -1.93
YBX3-214ENST00000544501 PRPF3O43395 683 aaKnown RBP3□□□□□ -1.93
YBX3-214ENST00000544501 TUSC2O75896 110 aa3□□□□□ -1.93
YBX3-214ENST00000544501 HLA-DOAP06340 250 aa3□□□□□ -1.93
YBX3-214ENST00000544501 SBK3P0C264 359 aa3□□□□□ -1.93
YBX3-214ENST00000544501 HTR1BP28222 390 aa3□□□□□ -1.93
YBX3-214ENST00000544501 SLC6A4P31645 630 aa3□□□□□ -1.93
YBX3-214ENST00000544501 PIK3CGP48736 1102 aa3□□□□□ -1.93
YBX3-214ENST00000544501 RNASE9P60153 205 aaKnown RBP3□□□□□ -1.93
YBX3-214ENST00000544501 KRTAP10-2P60368 255 aa3□□□□□ -1.93
YBX3-214ENST00000544501 GPSM2P81274 684 aa3□□□□□ -1.93
YBX3-214ENST00000544501 SLC25A3Q00325 362 aa3□□□□□ -1.93
YBX3-214ENST00000544501 GBX1Q14549 363 aa3□□□□□ -1.93
YBX3-214ENST00000544501 CCDC93Q567U6 631 aa3□□□□□ -1.93
YBX3-214ENST00000544501 CCDC157Q569K6 752 aa3□□□□□ -1.93
YBX3-214ENST00000544501 LCE1DQ5T752 114 aa3□□□□□ -1.93
YBX3-214ENST00000544501 EMC10Q5UCC4 262 aa3□□□□□ -1.93
YBX3-214ENST00000544501 SPRED1Q7Z699 444 aa3□□□□□ -1.93
YBX3-214ENST00000544501 SRGAP1Q7Z6B7 1085 aa3□□□□□ -1.93
YBX3-214ENST00000544501 FAM90A1Q86YD7 464 aa3□□□□□ -1.93
YBX3-214ENST00000544501 FAM43AQ8N2R8 423 aa3□□□□□ -1.93
YBX3-214ENST00000544501 ZNF276Q8N554 614 aa3□□□□□ -1.93
YBX3-214ENST00000544501 OR56A1Q8NGH5 318 aa3□□□□□ -1.93
YBX3-214ENST00000544501 KLHDC4Q8TBB5 520 aa3□□□□□ -1.93
YBX3-214ENST00000544501 SLC25A43Q8WUT9 341 aaPredicted RBP3□□□□□ -1.93
YBX3-214ENST00000544501 C8orf48Q96LL4 319 aa3□□□□□ -1.93
YBX3-214ENST00000544501 PLEKHG4BQ96PX9 1271 aa3□□□□□ -1.93
YBX3-214ENST00000544501 MED15Q96RN5 788 aa3□□□□□ -1.93
YBX3-214ENST00000544501 PNKPQ96T60 521 aa3□□□□□ -1.93
YBX3-214ENST00000544501 NEU1Q99519 415 aa3□□□□□ -1.93
YBX3-214ENST00000544501 TMEM60Q9H2L4 133 aa3□□□□□ -1.93
YBX3-214ENST00000544501 BRD9Q9H8M2 597 aa3□□□□□ -1.93
YBX3-214ENST00000544501 PRDM11Q9NQV5 511 aa3□□□□□ -1.93
YBX3-214ENST00000544501 KLHL11Q9NVR0 708 aa3□□□□□ -1.93
YBX3-214ENST00000544501 GEMIN8Q9NWZ8 242 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms