RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 PTPRJQ12913 1337 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 CARNS1A5YM72 827 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 EPOPA6NHQ4 379 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 F8W810 466 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 SLC16A3O15427 465 aaKnown RBP14.75□□□□□ -0.05
SP140-213ENST00000543928 CCDC192P0DO97 292 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 CLCNKBP51801 687 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 ZSCAN23Q3MJ62 389 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 GPR153Q6NV75 609 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 INTS8Q75QN2 995 aaKnown RBP14.75□□□□□ -0.05
SP140-213ENST00000543928 WDR49Q8IV35 697 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 PARD3BQ8TEW8 1205 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 CACTINQ8WUQ7 758 aaKnown RBP14.75□□□□□ -0.05
SP140-213ENST00000543928 DDX27Q96GQ7 796 aaKnown RBP14.75□□□□□ -0.05
SP140-213ENST00000543928 IGSF21Q96ID5 467 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 UROC1Q96N76 676 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 POP1Q99575 1024 aaKnown RBP14.75□□□□□ -0.05
SP140-213ENST00000543928 CGRRF1Q99675 332 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 C11orf84Q9BUA3 381 aaPredicted RBP14.75□□□□□ -0.05
SP140-213ENST00000543928 COLEC11Q9BWP8 271 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 SRRTQ9BXP5 876 aaKnown RBP14.75□□□□□ -0.05
SP140-213ENST00000543928 GZF1Q9H116 711 aaPredicted RBP14.75□□□□□ -0.05
SP140-213ENST00000543928 MARCH5Q9NX47 278 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 DPP3Q9NY33 737 aa14.75□□□□□ -0.05
SP140-213ENST00000543928 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.75□□□□□ -0.05
SP140-213ENST00000543928 CHD7Q9P2D1 2997 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 LRRIQ3A6PVS8 624 aaPredicted RBP14.74□□□□□ -0.05
SP140-213ENST00000543928 H3BNC9 293 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 PODXLO00592 558 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 FGF18O76093 207 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 KIF4AO95239 1232 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 ITGB1P05556 798 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 TMEM191BP0C7N4 346 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 KRT13P13646 458 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 TNNI1P19237 187 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 LRPAP1P30533 357 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 RPL9P32969 192 aaKnown RBP14.74□□□□□ -0.05
SP140-213ENST00000543928 VAMP7P51809 220 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 DLG4P78352 724 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 GPM6BQ13491 265 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 UPP1Q16831 310 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 TPD52L1Q16890 204 aaPredicted RBP14.74□□□□□ -0.05
SP140-213ENST00000543928 DCLRE1AQ6PJP8 1040 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 FILIP1Q7Z7B0 1213 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 OR5B17Q8NGF7 314 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 TMC2Q8TDI7 906 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 GDPD5Q8WTR4 605 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 BCL7CQ8WUZ0 217 aaPredicted RBP14.74□□□□□ -0.05
SP140-213ENST00000543928 BORCS6Q96GS4 357 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 TMEM169Q96HH4 297 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 ANKRD36BP1Q96IX9 119 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 FAM161BQ96MY7 647 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 MTMR12Q9C0I1 747 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 DNAJC25Q9H1X3 360 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 ALG13Q9NP73 1137 aaKnown RBP14.74□□□□□ -0.05
SP140-213ENST00000543928 INTS13Q9NVM9 706 aa14.74□□□□□ -0.05
SP140-213ENST00000543928 RFXAPO00287 272 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 B3GAT3O94766 335 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 FGFR1OPO95684 399 aaKnown RBP14.73□□□□□ -0.05
SP140-213ENST00000543928 TNNC2P02585 160 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 IGFBP6P24592 240 aaPredicted RBP14.73□□□□□ -0.05
SP140-213ENST00000543928 PLCB3Q01970 1234 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 BFSP1Q12934 665 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 GRIN2CQ14957 1233 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 DUOXA2Q1HG44 320 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 CCDC40Q4G0X9 1142 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 ANO6Q4KMQ2 910 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 C9orf57Q5W0N0 161 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 Q7L0L9 218 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 USP37Q86T82 979 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 C3orf58Q8NDZ4 430 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 HASPINQ8TF76 798 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 FUCA2Q9BTY2 467 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 PRDM12Q9H4Q4 367 aa14.73□□□□□ -0.05
SP140-213ENST00000543928 ARMCX3Q9UH62 379 aaPredicted RBP14.73□□□□□ -0.05
SP140-213ENST00000543928 TMEM189-UBE2V1I3L0A0 370 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 PPEF2O14830 753 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 GRM6O15303 877 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 TADA2AO75478 443 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 GNA14O95837 355 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 ITGB3P05106 788 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 TRIM49P0CI25 452 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 TRIM49CP0CI26 452 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 CLDN10P78369 228 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 KRT17Q04695 432 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 ENPEPQ07075 957 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 C1orf220Q5T0J3 134 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 FRMD5Q7Z6J6 570 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 C1orf127Q8N9H9 656 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 SPPL3Q8TCT6 385 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 ZNF516Q92618 1163 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 METTL14Q9HCE5 456 aaKnown RBP14.72□□□□□ -0.05
SP140-213ENST00000543928 ADAM28Q9UKQ2 775 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 PLXNA4Q9HCM2 1894 aa14.72□□□□□ -0.05
SP140-213ENST00000543928 ANO9A1A5B4 782 aa14.71□□□□□ -0.05
SP140-213ENST00000543928 PIRO00625 290 aa14.71□□□□□ -0.05
SP140-213ENST00000543928 IKBKBO14920 756 aa14.71□□□□□ -0.05
SP140-213ENST00000543928 LPXNO60711 386 aa14.71□□□□□ -0.05
SP140-213ENST00000543928 CSPG5O95196 566 aa14.71□□□□□ -0.05
SP140-213ENST00000543928 KRT19P08727 400 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms