RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 LNX1Q8TBB1 728 aaPredicted RBP15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 ARHGEF26Q96DR7 871 aa15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 PCYT2Q99447 389 aa15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 NAP1L4Q99733 375 aaKnown RBP15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 HSD17B14Q9BPX1 270 aa15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 ACP6Q9NPH0 428 aa15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 SLC9A2Q9UBY0 812 aa15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 SHBGP04278 402 aa15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 PSMC2P35998 433 aaKnown RBP15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 TCF7P36402 384 aaPredicted RBP15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 MAP2K1Q02750 393 aaPredicted RBP15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 LRRC14Q15048 493 aa15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 CAPRIN2Q6IMN6 1127 aaKnown RBP15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 DNAJC5GQ8N7S2 189 aa15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 LRRC57Q8N9N7 239 aa15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 METTL14Q9HCE5 456 aaKnown RBP15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 TRAF3IP3Q9Y228 551 aa15.31■□□□□ 0.04
SFSWAP-210ENST00000541286 GSTTP1A0A1W2PQM5 241 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 PPP2R2AP63151 447 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 PHLDB2Q86SQ0 1253 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 RUBCNQ92622 972 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 FAM20AQ96MK3 541 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 KIFC3Q9BVG8 833 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 ACTR5Q9H9F9 607 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 ATP6V0A4Q9HBG4 840 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 AGAP1Q9UPQ3 857 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 TGFB1I1O43294 461 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 STRNO43815 780 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 TNFRSF8P28908 595 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 HSPA9P38646 679 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 DRP2Q13474 957 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 MESDQ14696 234 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 HYIQ5T013 277 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 UBAP2Q5T6F2 1119 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 SCFD2Q8WU76 684 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 SPATS2LQ9NUQ6 558 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 ABCF3Q9NUQ8 709 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 CSDE1O75534 798 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 FERP16591 822 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 SLC8A1P32418 973 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 CCDC62Q6P9F0 684 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 NT5DC3Q86UY8 548 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 ARFGAP2Q8N6H7 521 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 SLC20A1Q8WUM9 679 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 CCT6BQ92526 530 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 ZNF570Q96NI8 536 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 SIX2Q9NPC8 291 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 UBE2TQ9NPD8 197 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 TRPC6Q9Y210 931 aa15.3■□□□□ 0.04
SFSWAP-210ENST00000541286 FCGRTP55899 365 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 MARSP56192 900 aaKnown RBP15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 RNASELQ05823 741 aaKnown RBP15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 CUL1Q13616 776 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 ANO5Q75V66 913 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 FMO2Q99518 471 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 PARVGQ9HBI0 331 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 PLCB1Q9NQ66 1216 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 SLC12A6Q9UHW9 1150 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 UNC80Q8N2C7 3258 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 GOLGA8IPA6NC78 632 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 SLC15A5A6NIM6 579 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 GOLGA8JA6NMD2 632 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 CAND2O75155 1236 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 ECHS1P30084 290 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 SOX5P35711 763 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 GCLMP48507 274 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 FMO5P49326 533 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 AP1ARQ63HQ0 302 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 B3GNT9Q6UX72 402 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 RUFY4Q6ZNE9 571 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 SYCE1Q8N0S2 351 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 USP6NLQ92738 828 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 SAAL1Q96ER3 474 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 IWS1Q96ST2 819 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 RNPEPQ9H4A4 650 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 ERVK-5Q9HDB9 667 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 DNAJC17Q9NVM6 304 aaKnown RBP15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 IRAK4Q9NWZ3 460 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 CPSF2Q9P2I0 782 aaKnown RBP15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 PTCH2Q9Y6C5 1203 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 SYNGAP1Q96PV0 1343 aa15.29■□□□□ 0.04
SFSWAP-210ENST00000541286 FOXN3O00409 490 aaPredicted RBP15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 NOP56O00567 594 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 PDHA1P08559 390 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 DR1Q01658 176 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 CACNB2Q08289 660 aaPredicted RBP15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 MTERF2Q49AM1 385 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 MOXD1Q6UVY6 613 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 ACTRT1Q8TDG2 376 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 BTBD6Q96KE9 485 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 F8VZ95 297 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 MGRN1O60291 552 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 MYL7Q01449 175 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 PPP2R5CQ13362 524 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 C10orf76Q5T2E6 689 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 ERICH1Q86X53 443 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 GPRASP2Q96D09 838 aa15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 PRMT1Q99873 361 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-210ENST00000541286 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.28■□□□□ 0.042e-6■■□□□ 12.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms