RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 CNTNAP2Q9UHC6 1331 aa9.53□□□□□ -0.88
DDB1-213ENST00000539332 RCCD1A6NED2 376 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 OGTO15294 1046 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 PJA2O43164 708 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 TPD52L2O43399 206 aaKnown RBP9.52□□□□□ -0.88
DDB1-213ENST00000539332 KIF5CO60282 957 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 ZC3H11AO75152 810 aaKnown RBP eCLIP9.52□□□□□ -0.88
DDB1-213ENST00000539332 GPR32O75388 356 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 GFPT2O94808 682 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 FERP16591 822 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 SOX5P35711 763 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 GTF2A1P52655 376 aaPredicted RBP9.52□□□□□ -0.88
DDB1-213ENST00000539332 WNT7BP56706 349 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 POU5F1Q01860 360 aaKnown RBP9.52□□□□□ -0.88
DDB1-213ENST00000539332 PTPN11Q06124 597 aaPredicted RBP9.52□□□□□ -0.88
DDB1-213ENST00000539332 PTGISQ16647 500 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 PHLDB3Q6NSJ2 640 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 GJB7Q6PEY0 223 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 MPZL3Q6UWV2 235 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 C10orf67Q8IYJ2 551 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 NME8Q8N427 588 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 SLC43A3Q8NBI5 491 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 U2AF1L4Q8WU68 220 aaKnown RBP9.52□□□□□ -0.88
DDB1-213ENST00000539332 SEMA4DQ92854 862 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 SCLT1Q96NL6 688 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 SPAG5Q96R06 1193 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 WDR24Q96S15 920 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 CGRRF1Q99675 332 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 ADAMTS10Q9H324 1103 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 VIPAS39Q9H9C1 493 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 TOPORSQ9NS56 1045 aaPredicted RBP9.52□□□□□ -0.88
DDB1-213ENST00000539332 PRMT7Q9NVM4 692 aaPredicted RBP9.52□□□□□ -0.88
DDB1-213ENST00000539332 DNAJC12Q9UKB3 198 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 GINS2Q9Y248 185 aa9.52□□□□□ -0.88
DDB1-213ENST00000539332 CSDE1O75534 798 aaKnown RBP9.52□□□□□ -0.89
DDB1-213ENST00000539332 IPO7O95373 1038 aaKnown RBP9.52□□□□□ -0.89
DDB1-213ENST00000539332 SGPL1O95470 568 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 ABL1P00519 1130 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 STAT1P42224 750 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 KLHL30Q0D2K2 578 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 DRAP1Q14919 205 aaPredicted RBP9.52□□□□□ -0.89
DDB1-213ENST00000539332 SLC18A3Q16572 532 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 ZACNQ401N2 412 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 ZBTB41Q5SVQ8 909 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 BEND6Q5SZJ8 279 aaPredicted RBP9.52□□□□□ -0.89
DDB1-213ENST00000539332 SMYD5Q6GMV2 418 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 SV2AQ7L0J3 742 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 ARHGEF19Q8IW93 802 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 FBXL13Q8NEE6 735 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 ZNF516Q92618 1163 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 WNT8BQ93098 351 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 POM121Q96HA1 1249 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 CDHR5Q9HBB8 845 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 LZTFL1Q9NQ48 299 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 TRMT13Q9NUP7 481 aaKnown RBP9.52□□□□□ -0.89
DDB1-213ENST00000539332 CDC23Q9UJX2 597 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 TNFSF13BQ9Y275 285 aa9.52□□□□□ -0.89
DDB1-213ENST00000539332 PTPRJQ12913 1337 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 CLDN3O15551 220 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 B4GALT5O43286 388 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 AKR1B10O60218 316 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 LRRN2O75325 713 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 CPP00450 1065 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 C4BPAP04003 597 aaKnown RBP9.51□□□□□ -0.89
DDB1-213ENST00000539332 ACOT2P49753 483 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 MNX1P50219 401 aaPredicted RBP9.51□□□□□ -0.89
DDB1-213ENST00000539332 MRPS6P82932 125 aaKnown RBP9.51□□□□□ -0.89
DDB1-213ENST00000539332 CYP27A1Q02318 531 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 PRPF4BQ13523 1007 aaKnown RBP9.51□□□□□ -0.89
DDB1-213ENST00000539332 SPA17Q15506 151 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 WHAMMP3Q1A5X7 153 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 TDRD12Q587J7 1177 aaKnown RBP9.51□□□□□ -0.89
DDB1-213ENST00000539332 ATF7IP2Q5U623 682 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 ZNF571Q7Z3V5 609 aaPredicted RBP9.51□□□□□ -0.89
DDB1-213ENST00000539332 RPAINQ86UA6 219 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 EFCAB13Q8IY85 973 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 PLCD3Q8N3E9 789 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 SHC3Q92529 594 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 JAKMIP2Q96AA8 810 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 CCDC127Q96BQ5 260 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 POP1Q99575 1024 aaKnown RBP9.51□□□□□ -0.89
DDB1-213ENST00000539332 OSMRQ99650 979 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 IFIH1Q9BYX4 1025 aaKnown RBP9.51□□□□□ -0.89
DDB1-213ENST00000539332 GCOM2Q9BZD3 368 aaPredicted RBP9.51□□□□□ -0.89
DDB1-213ENST00000539332 TSGA10Q9BZW7 698 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 LACRTQ9GZZ8 138 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 DEF6Q9H4E7 631 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 RAB20Q9NX57 234 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 RBAKQ9NYW8 714 aaPredicted RBP9.51□□□□□ -0.89
DDB1-213ENST00000539332 ANKFY1Q9P2R3 1169 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 CPSF3Q9UKF6 684 aaKnown RBP9.51□□□□□ -0.89
DDB1-213ENST00000539332 PCDHA13Q9Y5I0 950 aa9.51□□□□□ -0.89
DDB1-213ENST00000539332 A0A087X0T9 212 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 ARVCFO00192 962 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 STK25O00506 426 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 KRT86O43790 486 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 EVI5O60447 810 aa9.5□□□□□ -0.89
DDB1-213ENST00000539332 TFRCP02786 760 aaKnown RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 RPLP2P05387 115 aaKnown RBP9.5□□□□□ -0.89
DDB1-213ENST00000539332 FAM228BP0C875 321 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms