RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 DSG1Q02413 1049 aa24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 ADAM15Q13444 863 aa24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 SPATA1Q5VX52 437 aa24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 ERCC4Q92889 916 aaPredicted RBP24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 B3GALT6Q96L58 329 aa24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 FBXL18Q96ME1 805 aa24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 MRPL17Q9NRX2 175 aaKnown RBP24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 CLDND1Q9NY35 253 aa24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 RBAKQ9NYW8 714 aaPredicted RBP24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 CGNQ9P2M7 1197 aaKnown RBP24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 C2CD2Q9Y426 696 aa24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 PCDHA5Q9Y5H7 936 aa24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 CITO14578 2027 aa24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 TRIP11Q15643 1979 aa24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 XPOTO43592 962 aaKnown RBP24.66■■□□□ 1.54
SFSWAP-204ENST00000535399 IL18RAPO95256 599 aa24.66■■□□□ 1.54
SFSWAP-204ENST00000535399 GLP2RO95838 553 aa24.66■■□□□ 1.54
SFSWAP-204ENST00000535399 CA8P35219 290 aa24.66■■□□□ 1.54
SFSWAP-204ENST00000535399 LTBRP36941 435 aa24.66■■□□□ 1.54
SFSWAP-204ENST00000535399 TFF2Q03403 129 aa24.66■■□□□ 1.54
SFSWAP-204ENST00000535399 KCNC3Q14003 757 aa24.66■■□□□ 1.54
SFSWAP-204ENST00000535399 TMEM132DQ14C87 1099 aa24.66■■□□□ 1.54
SFSWAP-204ENST00000535399 USP41Q3LFD5 358 aa24.66■■□□□ 1.54
SFSWAP-204ENST00000535399 EFCAB13Q8IY85 973 aa24.66■■□□□ 1.54
SFSWAP-204ENST00000535399 VN1R2Q8NFZ6 395 aa24.66■■□□□ 1.54
SFSWAP-204ENST00000535399 GSDMAQ96QA5 445 aa24.66■■□□□ 1.54
SFSWAP-204ENST00000535399 HOOK1Q9UJC3 728 aaKnown RBP24.66■■□□□ 1.54
SFSWAP-204ENST00000535399 CLASP2O75122 1294 aaKnown RBP24.65■■□□□ 1.54
SFSWAP-204ENST00000535399 SMC2O95347 1197 aa24.65■■□□□ 1.54
SFSWAP-204ENST00000535399 ELAVL2Q12926 359 aaKnown RBP24.65■■□□□ 1.54
SFSWAP-204ENST00000535399 FAM171A1Q5VUB5 890 aa24.65■■□□□ 1.54
SFSWAP-204ENST00000535399 CBWD2Q8IUF1 395 aa24.65■■□□□ 1.54
SFSWAP-204ENST00000535399 GPR65Q8IYL9 337 aa24.65■■□□□ 1.54
SFSWAP-204ENST00000535399 BEST2Q8NFU1 509 aa24.65■■□□□ 1.54
SFSWAP-204ENST00000535399 GOLGA5Q8TBA6 731 aa24.65■■□□□ 1.54
SFSWAP-204ENST00000535399 NOC3LQ8WTT2 800 aaKnown RBP24.65■■□□□ 1.54
SFSWAP-204ENST00000535399 RXFP1Q9HBX9 757 aa24.65■■□□□ 1.54
SFSWAP-204ENST00000535399 KIAA1586Q9HCI6 787 aa24.65■■□□□ 1.54
SFSWAP-204ENST00000535399 RMND1Q9NWS8 449 aa24.65■■□□□ 1.54
SFSWAP-204ENST00000535399 SSX2IPQ9Y2D8 614 aa24.65■■□□□ 1.54
SFSWAP-204ENST00000535399 ZNF233A6NK53 670 aa24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 C2CD2LO14523 706 aa24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 TBX10O75333 385 aa24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 CNPP09543 421 aaKnown RBP24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 KCNA5P22460 613 aa24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 BRCC3P46736 316 aa24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 CYP2J2P51589 502 aa24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 RBM10P98175 930 aaKnown RBP24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 DLX2Q07687 328 aaPredicted RBP24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 RTP2Q5QGT7 225 aa24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 KIAA1841Q6NSI8 718 aa24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 GUF1Q8N442 669 aaKnown RBP24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 ATXN2LQ8WWM7 1075 aaKnown RBP24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 SMARCE1Q969G3 411 aa24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 KLHL5Q96PQ7 755 aa24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 TTPALQ9BTX7 342 aa24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 DMAC2Q9NW81 257 aa24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 MAPK8IP1Q9UQF2 711 aa24.64■■□□□ 1.54
SFSWAP-204ENST00000535399 XIRP2A4UGR9 3374 aa24.64■■□□□ 1.53
SFSWAP-204ENST00000535399 FSD2A1L4K1 749 aa24.63■■□□□ 1.53
SFSWAP-204ENST00000535399 I3L4J1 428 aa24.63■■□□□ 1.53
SFSWAP-204ENST00000535399 FGFR3P22607 806 aa24.63■■□□□ 1.53
SFSWAP-204ENST00000535399 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.63■■□□□ 1.53
SFSWAP-204ENST00000535399 EP400NLQ6ZTU2 488 aa24.63■■□□□ 1.53
SFSWAP-204ENST00000535399 NT5DC4Q86YG4 428 aa24.63■■□□□ 1.53
SFSWAP-204ENST00000535399 SMYD4Q8IYR2 804 aaPredicted RBP24.63■■□□□ 1.53
SFSWAP-204ENST00000535399 XXYLT1Q8NBI6 393 aa24.63■■□□□ 1.53
SFSWAP-204ENST00000535399 TMEM174Q8WUU8 243 aa24.63■■□□□ 1.53
SFSWAP-204ENST00000535399 RIN2Q8WYP3 895 aaPredicted RBP24.63■■□□□ 1.53
SFSWAP-204ENST00000535399 EMILIN2Q9BXX0 1053 aa24.63■■□□□ 1.53
SFSWAP-204ENST00000535399 PDE11AQ9HCR9 933 aa24.63■■□□□ 1.53
SFSWAP-204ENST00000535399 PDXKO00764 312 aa24.62■■□□□ 1.53
SFSWAP-204ENST00000535399 PPEF2O14830 753 aa24.62■■□□□ 1.53
SFSWAP-204ENST00000535399 TRAPPC3O43617 180 aa24.62■■□□□ 1.53
SFSWAP-204ENST00000535399 KIF20AO95235 890 aa24.62■■□□□ 1.53
SFSWAP-204ENST00000535399 TMEM184AQ6ZMB5 413 aa24.62■■□□□ 1.53
SFSWAP-204ENST00000535399 CEP57Q86XR8 500 aa24.62■■□□□ 1.53
SFSWAP-204ENST00000535399 SLC9A9Q8IVB4 645 aa24.62■■□□□ 1.53
SFSWAP-204ENST00000535399 SLC22A17Q8WUG5 538 aa24.62■■□□□ 1.53
SFSWAP-204ENST00000535399 PIK3R5Q8WYR1 880 aa24.62■■□□□ 1.53
SFSWAP-204ENST00000535399 CLEC1BQ9P126 229 aa24.62■■□□□ 1.53
SFSWAP-204ENST00000535399 HCFC2Q9Y5Z7 792 aa24.62■■□□□ 1.53
SFSWAP-204ENST00000535399 UNC80Q8N2C7 3258 aa24.62■■□□□ 1.53
SFSWAP-204ENST00000535399 ANO9A1A5B4 782 aa24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 H3BQ06 376 aaPredicted RBP24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 TEX28O15482 410 aa24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 NDUFV1P49821 464 aa24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 MRPS5P82675 430 aaKnown RBP24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 SNRNP35Q16560 246 aaKnown RBP24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 LEXMQ3ZCV2 418 aa24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 ZNF658Q5TYW1 1059 aaPredicted RBP24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 C9orf57Q5W0N0 161 aa24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 RDH13Q8NBN7 331 aa24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 SUSD3Q96L08 255 aa24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 DPP3Q9NY33 737 aa24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 MAN1B1Q9UKM7 699 aa24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 BARX2Q9UMQ3 279 aaPredicted RBP24.61■■□□□ 1.53
SFSWAP-204ENST00000535399 TRAF3IP3Q9Y228 551 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms