RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 RBM46Q8TBY0 533 aaKnown RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 AENQ8WTP8 325 aaKnown RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 ZNF668Q96K58 619 aaPredicted RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 RIT2Q99578 217 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 CBWD1Q9BRT8 395 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 ACAD9Q9H845 621 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 TMOD4Q9NZQ9 345 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 GABBR1Q9UBS5 961 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 RASAL2Q9UJF2 1139 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 ZNF180Q9UJW8 692 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 ATP8A1Q9Y2Q0 1164 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 ITIH6Q6UXX5 1313 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 LOXHD1Q8IVV2 1947 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 BPTFQ12830 3046 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 CCNFP41002 786 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 MAMDC4Q6UXC1 1216 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 ISLR2Q6UXK2 745 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 WDR75Q8IWA0 830 aaKnown RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 MYCT1Q8N699 235 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 RDH13Q8NBN7 331 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 BRI3BPQ8WY22 251 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 IFIH1Q9BYX4 1025 aaKnown RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 PCIF1Q9H4Z3 704 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 SIX2Q9NPC8 291 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 RBM12Q9NTZ6 932 aaKnown RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 PNMA2Q9UL42 364 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 HYOU1Q9Y4L1 999 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 EVPLQ92817 2033 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 CFAP73A6NFT4 308 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 SPATA31C2B4DYI2 1134 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 TRIM49P0CI25 452 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 TRIM49CP0CI26 452 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 UBA1P22314 1058 aaKnown RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 NR2F2P24468 414 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 EEF1GP26641 437 aaKnown RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 ABL2P42684 1182 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 PPATQ06203 517 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 CCDC15Q0P6D6 951 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 ADAM9Q13443 819 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 KNOP1Q1ED39 458 aaKnown RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 KCTD21Q4G0X4 260 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 ABHD15Q6UXT9 468 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 OTUD6AQ7L8S5 288 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 ADAT2Q7Z6V5 191 aaKnown RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 FBXO16Q8IX29 292 aaPredicted RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 GDAP1Q8TB36 358 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 NMD3Q96D46 503 aaKnown RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 FAM81BQ96LP2 452 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 SYT15Q9BQS2 421 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 PDLIM7Q9NR12 457 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 SLC5A4Q9NY91 659 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 TSC22D4Q9Y3Q8 395 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 SIP14410 1827 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 GSTTP1A0A1W2PQM5 241 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 BAG2O95816 211 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 FTCDO95954 541 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 CALCAP01258 141 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 ALOX15P16050 662 aaPredicted RBP9.62□□□□□ -0.87
SF3B2-216ENST00000534765 MYBPC3Q14896 1274 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 CFAP221Q4G0U5 840 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 GLE1Q53GS7 698 aaKnown RBP9.62□□□□□ -0.87
SF3B2-216ENST00000534765 HGSNATQ68CP4 663 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 CAPN12Q6ZSI9 719 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 MCF2L2Q86YR7 1114 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 ANKRD13AQ8IZ07 590 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 STMN2Q93045 179 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 LRRC45Q96CN5 670 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 DNAJC7Q99615 494 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 DAAM1Q9Y4D1 1078 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 MYH10P35580 1976 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 ZBTB42B2RXF5 422 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 NDUFB5O43674 189 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 TMCC1O94876 653 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 KRT18P05783 430 aaKnown RBP9.62□□□□□ -0.87
SF3B2-216ENST00000534765 PDE6CP51160 858 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 ACTR2P61160 394 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 SFSWAPQ12872 951 aaKnown RBP9.62□□□□□ -0.87
SF3B2-216ENST00000534765 C16orf87Q6PH81 154 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 ERO1BQ86YB8 467 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 CCNJLQ8IV13 435 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 LRRC34Q8IZ02 419 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 POP1Q99575 1024 aaKnown RBP9.62□□□□□ -0.87
SF3B2-216ENST00000534765 TRAIPQ9BWF2 469 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 NACA2Q9H009 215 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 EBF2Q9HAK2 575 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 CAPN11Q9UMQ6 739 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 PACSIN2Q9UNF0 486 aaPredicted RBP9.62□□□□□ -0.87
SF3B2-216ENST00000534765 AGTPBP1Q9UPW5 1226 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 CSADQ9Y600 493 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 SPTBN5Q9NRC6 3674 aaKnown RBP9.62□□□□□ -0.87
SF3B2-216ENST00000534765 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.62□□□□□ -0.87
SF3B2-216ENST00000534765 LRRC53A6NM62 1247 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 BTBD19C9JJ37 291 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 SLC16A4O15374 487 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 SKIP12755 728 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 EDNRBP24530 442 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 CACNA2D1P54289 1103 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 ANKRD35Q8N283 1001 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 TEX9Q8N6V9 391 aa9.62□□□□□ -0.87
SF3B2-216ENST00000534765 TRAPPC12Q8WVT3 735 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms