RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 KCNK12Q9HB15 430 aa25.58■■□□□ 1.69
SMPD1-209ENST00000533196 NUB1Q9Y5A7 615 aa25.58■■□□□ 1.69
SMPD1-209ENST00000533196 ZFP37Q9Y6Q3 630 aaPredicted RBP25.58■■□□□ 1.69
SMPD1-209ENST00000533196 PIEZO1Q92508 2521 aa25.57■■□□□ 1.68
SMPD1-209ENST00000533196 MEFVO15553 781 aaPredicted RBP25.57■■□□□ 1.68
SMPD1-209ENST00000533196 STX6O43752 255 aa25.57■■□□□ 1.68
SMPD1-209ENST00000533196 C8AP07357 584 aa25.57■■□□□ 1.68
SMPD1-209ENST00000533196 IGFBP6P24592 240 aaPredicted RBP25.57■■□□□ 1.68
SMPD1-209ENST00000533196 SNX21Q969T3 373 aa25.57■■□□□ 1.68
SMPD1-209ENST00000533196 FIZ1Q96SL8 496 aa25.57■■□□□ 1.68
SMPD1-209ENST00000533196 HAPLN2Q9GZV7 340 aa25.57■■□□□ 1.68
SMPD1-209ENST00000533196 CDY1Q9Y6F8 540 aa25.57■■□□□ 1.68
SMPD1-209ENST00000533196 TTC26A0AVF1 554 aa25.56■■□□□ 1.68
SMPD1-209ENST00000533196 OGTO15294 1046 aa25.56■■□□□ 1.68
SMPD1-209ENST00000533196 ADAM12O43184 909 aa25.56■■□□□ 1.68
SMPD1-209ENST00000533196 XPOTO43592 962 aaKnown RBP25.56■■□□□ 1.68
SMPD1-209ENST00000533196 N4BP1O75113 896 aaKnown RBP25.56■■□□□ 1.68
SMPD1-209ENST00000533196 XYLBO75191 536 aa25.56■■□□□ 1.68
SMPD1-209ENST00000533196 CXCL8P10145 99 aa25.56■■□□□ 1.68
SMPD1-209ENST00000533196 CYP3A5P20815 502 aa25.56■■□□□ 1.68
SMPD1-209ENST00000533196 NUBP1P53384 320 aa25.56■■□□□ 1.68
SMPD1-209ENST00000533196 SLC39A14Q15043 492 aa25.56■■□□□ 1.68
SMPD1-209ENST00000533196 SEZ6Q53EL9 994 aa25.56■■□□□ 1.68
SMPD1-209ENST00000533196 AXDND1Q5T1B0 1012 aaPredicted RBP25.56■■□□□ 1.68
SMPD1-209ENST00000533196 SLC8B1Q6J4K2 584 aa25.56■■□□□ 1.68
SMPD1-209ENST00000533196 USP49Q70CQ1 688 aa25.56■■□□□ 1.68
SMPD1-209ENST00000533196 MAP4K3Q8IVH8 894 aa25.56■■□□□ 1.68
SMPD1-209ENST00000533196 ZHX3Q9H4I2 956 aa25.56■■□□□ 1.68
SMPD1-209ENST00000533196 UBQLN1Q9UMX0 589 aaKnown RBP25.56■■□□□ 1.68
SMPD1-209ENST00000533196 DUSP12Q9UNI6 340 aa25.56■■□□□ 1.68
SMPD1-209ENST00000533196 MYH15Q9Y2K3 1946 aa25.55■■□□□ 1.68
SMPD1-209ENST00000533196 H7C4K7 107 aa25.55■■□□□ 1.68
SMPD1-209ENST00000533196 PDIA4P13667 645 aaKnown RBP25.55■■□□□ 1.68
SMPD1-209ENST00000533196 PPP2R3AQ06190 1150 aa25.55■■□□□ 1.68
SMPD1-209ENST00000533196 SPECC1Q5M775 1068 aa25.55■■□□□ 1.68
SMPD1-209ENST00000533196 RRAGBQ5VZM2 374 aa25.55■■□□□ 1.68
SMPD1-209ENST00000533196 FAM173BQ6P4H8 233 aa25.55■■□□□ 1.68
SMPD1-209ENST00000533196 CD302Q8IX05 232 aa25.55■■□□□ 1.68
SMPD1-209ENST00000533196 C18orf25Q96B23 403 aaPredicted RBP25.55■■□□□ 1.68
SMPD1-209ENST00000533196 SUSD3Q96L08 255 aa25.55■■□□□ 1.68
SMPD1-209ENST00000533196 USP28Q96RU2 1077 aa25.55■■□□□ 1.68
SMPD1-209ENST00000533196 I3L4J1 428 aa25.54■■□□□ 1.68
SMPD1-209ENST00000533196 ADRB2P07550 413 aa25.54■■□□□ 1.68
SMPD1-209ENST00000533196 AVPR2P30518 371 aa25.54■■□□□ 1.68
SMPD1-209ENST00000533196 LRPAP1P30533 357 aa25.54■■□□□ 1.68
SMPD1-209ENST00000533196 MRPL58Q14197 206 aaKnown RBP25.54■■□□□ 1.68
SMPD1-209ENST00000533196 VARS2Q5ST30 1063 aaKnown RBP25.54■■□□□ 1.68
SMPD1-209ENST00000533196 CCDC73Q6ZRK6 1079 aa25.54■■□□□ 1.68
SMPD1-209ENST00000533196 APPL2Q8NEU8 664 aa25.54■■□□□ 1.68
SMPD1-209ENST00000533196 ZNF461Q8TAF7 563 aa25.54■■□□□ 1.68
SMPD1-209ENST00000533196 HVCN1Q96D96 273 aa25.54■■□□□ 1.68
SMPD1-209ENST00000533196 MYADMQ96S97 322 aa25.54■■□□□ 1.68
SMPD1-209ENST00000533196 SEL1LQ9UBV2 794 aa25.54■■□□□ 1.68
SMPD1-209ENST00000533196 A0A0B4J269 797 aa25.53■■□□□ 1.68
SMPD1-209ENST00000533196 FAM189A1O60320 539 aa25.53■■□□□ 1.68
SMPD1-209ENST00000533196 NMT1P30419 496 aaKnown RBP25.53■■□□□ 1.68
SMPD1-209ENST00000533196 HOXD11P31277 338 aaPredicted RBP25.53■■□□□ 1.68
SMPD1-209ENST00000533196 MCM4P33991 863 aa25.53■■□□□ 1.68
SMPD1-209ENST00000533196 NASPP49321 788 aaPredicted RBP25.53■■□□□ 1.68
SMPD1-209ENST00000533196 CEBPZQ03701 1054 aaKnown RBP25.53■■□□□ 1.68
SMPD1-209ENST00000533196 ZBTB6Q15916 424 aa25.53■■□□□ 1.68
SMPD1-209ENST00000533196 SLFN12LQ6IEE8 588 aa25.53■■□□□ 1.68
SMPD1-209ENST00000533196 RSPO2Q6UXX9 243 aaPredicted RBP25.53■■□□□ 1.68
SMPD1-209ENST00000533196 SV2BQ7L1I2 683 aa25.53■■□□□ 1.68
SMPD1-209ENST00000533196 SLC7A14Q8TBB6 771 aa25.53■■□□□ 1.68
SMPD1-209ENST00000533196 CLIC6Q96NY7 704 aa25.53■■□□□ 1.68
SMPD1-209ENST00000533196 MSTO1Q9BUK6 570 aa25.53■■□□□ 1.68
SMPD1-209ENST00000533196 RPF1Q9H9Y2 349 aaKnown RBP25.53■■□□□ 1.68
SMPD1-209ENST00000533196 TBC1D4O60343 1298 aa25.52■■□□□ 1.68
SMPD1-209ENST00000533196 ABLIM3O94929 683 aa25.52■■□□□ 1.68
SMPD1-209ENST00000533196 LAMP2P13473 410 aa25.52■■□□□ 1.68
SMPD1-209ENST00000533196 GAP43P17677 238 aa25.52■■□□□ 1.68
SMPD1-209ENST00000533196 FSHRP23945 695 aa25.52■■□□□ 1.68
SMPD1-209ENST00000533196 TNFSF9P41273 254 aa25.52■■□□□ 1.68
SMPD1-209ENST00000533196 POU5F1Q01860 360 aaKnown RBP25.52■■□□□ 1.68
SMPD1-209ENST00000533196 ROR1Q01973 937 aa25.52■■□□□ 1.68
SMPD1-209ENST00000533196 GET4Q7L5D6 327 aaPredicted RBP25.52■■□□□ 1.68
SMPD1-209ENST00000533196 KIF12Q96FN5 646 aa25.52■■□□□ 1.68
SMPD1-209ENST00000533196 SMOC2Q9H3U7 446 aa25.52■■□□□ 1.68
SMPD1-209ENST00000533196 FOXD4L1Q9NU39 408 aa25.52■■□□□ 1.68
SMPD1-209ENST00000533196 TUBGCP4Q9UGJ1 667 aa25.52■■□□□ 1.68
SMPD1-209ENST00000533196 CACNA1HO95180 2353 aa25.51■■□□□ 1.67
SMPD1-209ENST00000533196 PAX3P23760 479 aa25.51■■□□□ 1.67
SMPD1-209ENST00000533196 PTPN5P54829 565 aa25.51■■□□□ 1.67
SMPD1-209ENST00000533196 ENOX2Q16206 610 aaKnown RBP25.51■■□□□ 1.67
SMPD1-209ENST00000533196 ZNF280DQ6N043 979 aa25.51■■□□□ 1.67
SMPD1-209ENST00000533196 ZNF720Q7Z2F6 126 aa25.51■■□□□ 1.67
SMPD1-209ENST00000533196 GRASPQ7Z6J2 395 aaPredicted RBP25.51■■□□□ 1.67
SMPD1-209ENST00000533196 DDX12PQ92771 950 aa25.51■■□□□ 1.67
SMPD1-209ENST00000533196 OXCT2Q9BYC2 517 aaPredicted RBP25.51■■□□□ 1.67
SMPD1-209ENST00000533196 CPSF3Q9UKF6 684 aaKnown RBP25.51■■□□□ 1.67
SMPD1-209ENST00000533196 MAFFQ9ULX9 164 aa25.51■■□□□ 1.67
SMPD1-209ENST00000533196 PCDHB8Q9UN66 801 aa25.51■■□□□ 1.67
SMPD1-209ENST00000533196 STYXL1Q9Y6J8 313 aa25.51■■□□□ 1.67
SMPD1-209ENST00000533196 LACTBL1A8MY62 500 aa25.5■■□□□ 1.67
SMPD1-209ENST00000533196 M0QZQ0 153 aa25.5■■□□□ 1.67
SMPD1-209ENST00000533196 CCL16O15467 120 aa25.5■■□□□ 1.67
SMPD1-209ENST00000533196 PDGFBP01127 241 aaPredicted RBP25.5■■□□□ 1.67
SMPD1-209ENST00000533196 ELF1P32519 619 aa25.5■■□□□ 1.67
SMPD1-209ENST00000533196 VCPP55072 806 aaKnown RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms