RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 ANKRD13AQ8IZ07 590 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 ELMOD1Q8N336 334 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 RASGRP4Q8TDF6 673 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 TRPV5Q9NQA5 729 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 INPP5FQ9Y2H2 1132 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 KITP10721 976 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 HSPD1P10809 573 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 BMP3P12645 472 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 TARSP26639 723 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 COPB2P35606 906 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 RGS2P41220 211 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 DYNLT1P63172 113 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 KRR1Q13601 381 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 ADRM1Q16186 407 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 ME3Q16798 604 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 EXOC3L4Q17RC7 722 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 SYDE2Q5VT97 1194 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 EPM2AIP1Q7L775 607 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 DNAAF3Q8N9W5 541 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 LINC00116Q8NCU8 138 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 OSCP1Q8WVF1 389 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 SYMPKQ92797 1274 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.33□□□□□ -1.244e-6■■□□□ 14.1
TGFBR3-210ENST00000533089 CLIC6Q96NY7 704 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 TSR3Q9UJK0 312 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 ITIH6Q6UXX5 1313 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 SPDYE5A6NIY4 337 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 ZNF233A6NK53 670 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 FAM25AB3EWG3 89 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 FAM25CB3EWG5 89 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 FAM25GB3EWG6 89 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 CCDC22O60826 627 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 RGS20O76081 388 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 CHEK2O96017 543 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 ENO1P06733 434 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 CYP11B2P19099 503 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 EIF4BP23588 611 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 OASLQ15646 514 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 GRAMD1AQ96CP6 724 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 EEF2KMTQ96G04 330 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 ACCSQ96QU6 501 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 GSNP06396 782 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 PRKACAP17612 351 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 CD58P19256 250 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 PTGDRQ13258 359 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 ACAP1Q15027 740 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 ATG14Q6ZNE5 492 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 RNF207Q6ZRF8 634 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 SH3BP5LQ7L8J4 393 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 PODNQ7Z5L7 613 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 PNMA3Q9UL41 463 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 BLOC1S6Q9UL45 172 aa7.33□□□□□ -1.24
TGFBR3-210ENST00000533089 CCDC162PA2VCL2 907 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 USP17L3A6NCW0 530 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 USP17L4A6NCW7 530 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 PGRMC1O00264 195 aaKnown RBP7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 DPYSL4O14531 572 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 RASSF9O75901 435 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 CAMTA2O94983 1202 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 CPP00450 1065 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 FGAP02671 866 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 IGKV5-2P06315 115 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 FESP07332 822 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 CIITAP33076 1130 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 SOX5P35711 763 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 GPATCH4Q5T3I0 446 aaKnown RBP7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 RNF219Q5W0B1 726 aaPredicted RBP7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 IYDQ6PHW0 289 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 USP17L1Q7RTZ2 530 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 DEFB132Q7Z7B7 95 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 SCUBE1Q8IWY4 988 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 CRAMP1Q96RY5 1269 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 TRIM15Q9C019 465 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 PLGRKTQ9HBL7 147 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 RPRD1BQ9NQG5 326 aaKnown RBP7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 FAM8A1Q9UBU6 413 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 ARHGEF37A1IGU5 675 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 APOL1O14791 398 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 RGL2O15211 777 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 CLIC2O15247 247 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 NDUFA8P51970 172 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 KDSRQ06136 332 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 ACCSLQ4AC99 568 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 PPP1R15BQ5SWA1 713 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 FRA10AC1Q70Z53 315 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 SP8Q8IXZ3 490 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 SCG3Q8WXD2 468 aaKnown RBP7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 PRCCQ92733 491 aaPredicted RBP7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 SIPA1Q96FS4 1042 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 MARCH7Q9H992 704 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 RNF181Q9P0P0 153 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 MEGF6O75095 1541 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 BTN3A3O00478 584 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 GPC4O75487 556 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 PLS3P13797 630 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 ARL4AP40617 200 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 ATN1P54259 1190 aaPredicted RBP7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 PTH1RQ03431 593 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 RNF220Q5VTB9 566 aa7.32□□□□□ -1.24
TGFBR3-210ENST00000533089 OR6B2Q6IFH4 312 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms