RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 Q8N9P0 234 aaPredicted RBP6.37□□□□□ -1.39
PTPRK-220ENST00000531466 CLRN3Q8NCR9 226 aa6.37□□□□□ -1.39
PTPRK-220ENST00000531466 DPF1Q92782 380 aa6.37□□□□□ -1.39
PTPRK-220ENST00000531466 HOXB13Q92826 284 aaPredicted RBP6.37□□□□□ -1.39
PTPRK-220ENST00000531466 MFSD3Q96ES6 412 aa6.37□□□□□ -1.39
PTPRK-220ENST00000531466 FEZ1Q99689 392 aa6.37□□□□□ -1.39
PTPRK-220ENST00000531466 QRSL1Q9H0R6 528 aaKnown RBP6.37□□□□□ -1.39
PTPRK-220ENST00000531466 PIF1Q9H611 641 aa6.37□□□□□ -1.39
PTPRK-220ENST00000531466 ACTL7AQ9Y615 435 aa6.37□□□□□ -1.39
PTPRK-220ENST00000531466 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.36□□□□□ -1.39
PTPRK-220ENST00000531466 YY2O15391 372 aa6.36□□□□□ -1.39
PTPRK-220ENST00000531466 EXOSC10Q01780 885 aaKnown RBP6.36□□□□□ -1.39
PTPRK-220ENST00000531466 TSTD2Q5T7W7 516 aa6.36□□□□□ -1.39
PTPRK-220ENST00000531466 FAM180AQ6UWF9 173 aa6.36□□□□□ -1.39
PTPRK-220ENST00000531466 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.36□□□□□ -1.39
PTPRK-220ENST00000531466 PEG10Q86TG7 708 aaKnown RBP6.36□□□□□ -1.39
PTPRK-220ENST00000531466 TGFBRAP1Q8WUH2 860 aa6.36□□□□□ -1.39
PTPRK-220ENST00000531466 SREK1Q8WXA9 508 aaKnown RBP6.36□□□□□ -1.39
PTPRK-220ENST00000531466 AUTS2Q8WXX7 1259 aa6.36□□□□□ -1.39
PTPRK-220ENST00000531466 SARAFQ96BY9 339 aa6.36□□□□□ -1.39
PTPRK-220ENST00000531466 RBM12Q9NTZ6 932 aaKnown RBP6.36□□□□□ -1.39
PTPRK-220ENST00000531466 SCOCQ9UIL1 159 aa6.36□□□□□ -1.39
PTPRK-220ENST00000531466 RUVBL1Q9Y265 456 aaKnown RBP6.36□□□□□ -1.39
PTPRK-220ENST00000531466 MAPK10P53779 464 aa6.35□□□□□ -1.39
PTPRK-220ENST00000531466 PPP3CAQ08209 521 aa6.35□□□□□ -1.39
PTPRK-220ENST00000531466 SEM1Q6ZVN7 128 aa6.35□□□□□ -1.39
PTPRK-220ENST00000531466 PTF1AQ7RTS3 328 aa6.35□□□□□ -1.39
PTPRK-220ENST00000531466 USP7Q93009 1102 aa6.35□□□□□ -1.39
PTPRK-220ENST00000531466 FATE1Q969F0 183 aa6.35□□□□□ -1.39
PTPRK-220ENST00000531466 PNKPQ96T60 521 aa6.35□□□□□ -1.39
PTPRK-220ENST00000531466 TIMP4Q99727 224 aa6.35□□□□□ -1.39
PTPRK-220ENST00000531466 GREM2Q9H772 168 aa6.35□□□□□ -1.39
PTPRK-220ENST00000531466 IFT122Q9HBG6 1241 aa6.35□□□□□ -1.39
PTPRK-220ENST00000531466 ENTPD2Q9Y5L3 495 aa6.35□□□□□ -1.39
PTPRK-220ENST00000531466 CDHR4A6H8M9 788 aa6.34□□□□□ -1.39
PTPRK-220ENST00000531466 CELA2AP08217 269 aa6.34□□□□□ -1.39
PTPRK-220ENST00000531466 BPIP17213 487 aa6.34□□□□□ -1.39
PTPRK-220ENST00000531466 PCSK1P29120 753 aa6.34□□□□□ -1.39
PTPRK-220ENST00000531466 ID4P47928 161 aa6.34□□□□□ -1.39
PTPRK-220ENST00000531466 MRPS9P82933 396 aaKnown RBP6.34□□□□□ -1.39
PTPRK-220ENST00000531466 MAPK7Q13164 816 aa6.34□□□□□ -1.39
PTPRK-220ENST00000531466 SRSF7Q16629 238 aaKnown RBP eCLIP6.34□□□□□ -1.39
PTPRK-220ENST00000531466 MUM1Q2TAK8 710 aa6.34□□□□□ -1.39
PTPRK-220ENST00000531466 DALRD3Q5D0E6 543 aaKnown RBP6.34□□□□□ -1.39
PTPRK-220ENST00000531466 MUM1L1Q5H9M0 696 aa6.34□□□□□ -1.39
PTPRK-220ENST00000531466 KAZNQ674X7 775 aa6.34□□□□□ -1.39
PTPRK-220ENST00000531466 ZNF425Q6IV72 752 aa6.34□□□□□ -1.39
PTPRK-220ENST00000531466 TFAP2BQ92481 460 aa6.34□□□□□ -1.39
PTPRK-220ENST00000531466 FBXL20Q96IG2 436 aa6.34□□□□□ -1.39
PTPRK-220ENST00000531466 ACE2Q9BYF1 805 aaPredicted RBP6.34□□□□□ -1.39
PTPRK-220ENST00000531466 GSTO2Q9H4Y5 243 aa6.34□□□□□ -1.39
PTPRK-220ENST00000531466 TMEM140Q9NV12 185 aa6.34□□□□□ -1.39
PTPRK-220ENST00000531466 SETD1BQ9UPS6 1966 aaKnown RBP6.34□□□□□ -1.39
PTPRK-220ENST00000531466 NEMP1O14524 444 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 ORC4O43929 436 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 SESN3P58005 492 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 SLFN5Q08AF3 891 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 GJC2Q5T442 439 aaPredicted RBP6.33□□□□□ -1.4
PTPRK-220ENST00000531466 KIAA0895LQ68EN5 471 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 VWA1Q6PCB0 445 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 AMIGO2Q86SJ2 522 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 CMIPQ8IY22 773 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 FITM2Q8N6M3 262 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 TBC1D15Q8TC07 691 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 HASPINQ8TF76 798 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 NUP133Q8WUM0 1156 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 TMEM125Q96AQ2 219 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 MED15Q96RN5 788 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 PLAAQ9Y263 795 aa6.33□□□□□ -1.4
PTPRK-220ENST00000531466 TCRBV7S2A1N4TA0A589 114 aa6.32□□□□□ -1.4
PTPRK-220ENST00000531466 IKBKBO14920 756 aa6.32□□□□□ -1.4
PTPRK-220ENST00000531466 ELFN1P0C7U0 828 aa6.32□□□□□ -1.4
PTPRK-220ENST00000531466 ALAS1P13196 640 aa6.32□□□□□ -1.4
PTPRK-220ENST00000531466 EZH2Q15910 746 aaKnown RBP6.32□□□□□ -1.4
PTPRK-220ENST00000531466 Q8NA96 180 aa6.32□□□□□ -1.4
PTPRK-220ENST00000531466 CASKIN2Q8WXE0 1202 aa6.32□□□□□ -1.4
PTPRK-220ENST00000531466 CCDC151A5D8V7 595 aa6.31□□□□□ -1.4
PTPRK-220ENST00000531466 MPPED1O15442 326 aa6.31□□□□□ -1.4
PTPRK-220ENST00000531466 TEX33O43247 280 aa6.31□□□□□ -1.4
PTPRK-220ENST00000531466 CDC45O75419 566 aa6.31□□□□□ -1.4
PTPRK-220ENST00000531466 FCER1AP12319 257 aa6.31□□□□□ -1.4
PTPRK-220ENST00000531466 WT1P19544 449 aaPredicted RBP6.31□□□□□ -1.4
PTPRK-220ENST00000531466 ITPKBP27987 946 aa6.31□□□□□ -1.4
PTPRK-220ENST00000531466 GRIA3P42263 894 aa6.31□□□□□ -1.4
PTPRK-220ENST00000531466 SLC6A9P48067 706 aa6.31□□□□□ -1.4
PTPRK-220ENST00000531466 SEPT2Q15019 361 aa6.31□□□□□ -1.4
PTPRK-220ENST00000531466 TSHZ1Q6ZSZ6 1077 aa6.31□□□□□ -1.4
PTPRK-220ENST00000531466 CCHCR1Q8TD31 782 aa6.31□□□□□ -1.4
PTPRK-220ENST00000531466 ADI1Q9BV57 179 aa6.31□□□□□ -1.4
PTPRK-220ENST00000531466 A0A087X0B3 334 aa6.3□□□□□ -1.4
PTPRK-220ENST00000531466 GOLGA8AA7E2F4 631 aa6.3□□□□□ -1.4
PTPRK-220ENST00000531466 KIAA0391O15091 583 aaKnown RBP6.3□□□□□ -1.4
PTPRK-220ENST00000531466 PDE8AO60658 829 aa6.3□□□□□ -1.4
PTPRK-220ENST00000531466 ULK1O75385 1050 aa6.3□□□□□ -1.4
PTPRK-220ENST00000531466 GPR32O75388 356 aa6.3□□□□□ -1.4
PTPRK-220ENST00000531466 ENDOD1O94919 500 aa6.3□□□□□ -1.4
PTPRK-220ENST00000531466 PRKCGP05129 697 aa6.3□□□□□ -1.4
PTPRK-220ENST00000531466 TOR2AQ5JU69 321 aa6.3□□□□□ -1.4
PTPRK-220ENST00000531466 PDPRQ8NCN5 879 aa6.3□□□□□ -1.4
PTPRK-220ENST00000531466 SLC30A5Q8TAD4 765 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms