RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 MRPS18AQ9NVS2 196 aaKnown RBP3.97□□□□□ -1.77
CD44-229ENST00000528672 LZTS1Q9Y250 596 aa3.97□□□□□ -1.77
CD44-229ENST00000528672 VWA7Q9Y334 891 aa3.97□□□□□ -1.77
CD44-229ENST00000528672 ACTL7AQ9Y615 435 aa3.97□□□□□ -1.77
CD44-229ENST00000528672 KPNA5O15131 536 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 ITGA10O75578 1167 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 RPL17P18621 184 aaKnown RBP3.96□□□□□ -1.78
CD44-229ENST00000528672 TNFSF4P23510 183 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 PHKA1P46020 1223 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 RENBPP51606 427 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 ADCY7P51828 1080 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 CASP5P51878 434 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 NRG3P56975 720 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 PPP2CBP62714 309 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 RAB1AP62820 205 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 PPP2CAP67775 309 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 TNFAIP2Q03169 654 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 NFYCQ13952 458 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 FGL2Q14314 439 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 ZNF568Q3ZCX4 644 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 DGKKQ5KSL6 1271 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 WDR78Q5VTH9 848 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 CCDC174Q6PII3 467 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 APOA5Q6Q788 366 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 ARHGEF18Q6ZSZ5 1173 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 GLB1L2Q8IW92 636 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 NKAPQ8N5F7 415 aaKnown RBP3.96□□□□□ -1.78
CD44-229ENST00000528672 SPATA5Q8NB90 893 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 IPO4Q8TEX9 1081 aaKnown RBP3.96□□□□□ -1.78
CD44-229ENST00000528672 ATXN2LQ8WWM7 1075 aaKnown RBP3.96□□□□□ -1.78
CD44-229ENST00000528672 MTFMTQ96DP5 389 aaKnown RBP3.96□□□□□ -1.78
CD44-229ENST00000528672 APIPQ96GX9 242 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 PAWRQ96IZ0 340 aaKnown RBP3.96□□□□□ -1.78
CD44-229ENST00000528672 BDH2Q9BUT1 245 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 SSBP3Q9BWW4 388 aaPredicted RBP3.96□□□□□ -1.78
CD44-229ENST00000528672 C1QTNF3Q9BXJ4 246 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 C22orf23Q9BZE7 217 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 BTBD1Q9H0C5 482 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 MEGF9Q9H1U4 602 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 TMPRSS5Q9H3S3 457 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 CERS4Q9HA82 394 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 KIAA1586Q9HCI6 787 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 STARD7Q9NQZ5 370 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 RBM12Q9NTZ6 932 aaKnown RBP3.96□□□□□ -1.78
CD44-229ENST00000528672 TRPS1Q9UHF7 1281 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 SLC45A2Q9UMX9 530 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 CORO2BQ9UQ03 480 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 PCDHA3Q9Y5H8 950 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 DGKBQ9Y6T7 804 aa3.96□□□□□ -1.78
CD44-229ENST00000528672 CCDC78A2IDD5 438 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 FAM171A2A8MVW0 826 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 H3BUI4 141 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 FOXN3O00409 490 aaPredicted RBP3.95□□□□□ -1.78
CD44-229ENST00000528672 PHGDHO43175 533 aaKnown RBP3.95□□□□□ -1.78
CD44-229ENST00000528672 FRS3O43559 492 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 PRSS23O95084 383 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 ADRB1P08588 477 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 ABCB4P21439 1286 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 SLC6A4P31645 630 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 DEKP35659 375 aaKnown RBP3.95□□□□□ -1.78
CD44-229ENST00000528672 CHKAP35790 457 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 PPM1AP35813 382 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 SREBF1P36956 1147 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 KIR2DL3P43628 341 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 STT3AP46977 705 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 ALDH1A3P47895 512 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 CCT5P48643 541 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 HK3P52790 923 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 SESN2P58004 480 aaPredicted RBP3.95□□□□□ -1.78
CD44-229ENST00000528672 LMOD3Q0VAK6 560 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 MGAT2Q10469 447 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 ELF2Q15723 593 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 FLYWCH1Q4VC44 716 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 PRR16Q569H4 304 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 FAM209BQ5JX69 171 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 IZUMO3Q5VZ72 239 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 GLB1LQ6UWU2 654 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 USP30Q70CQ3 517 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 TRMT2AQ8IZ69 625 aaKnown RBP3.95□□□□□ -1.78
CD44-229ENST00000528672 PQLC1Q8N2U9 271 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 TMTC2Q8N394 836 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 TEX19Q8NA77 164 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 C3orf20Q8ND61 904 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 GPR156Q8NFN8 814 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 SNX33Q8WV41 574 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 KIAA1191Q96A73 305 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 UIMC1Q96RL1 719 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 C1orf43Q9BWL3 253 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 KCNH6Q9H252 994 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 AS3MTQ9HBK9 375 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 GPRC5BQ9NZH0 403 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.95□□□□□ -1.78
CD44-229ENST00000528672 CDC23Q9UJX2 597 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 AJAP1Q9UKB5 411 aaPredicted RBP3.95□□□□□ -1.78
CD44-229ENST00000528672 PADI4Q9UM07 663 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 NR2E1Q9Y466 385 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 PNPLA7Q6ZV29 1317 aa3.95□□□□□ -1.78
CD44-229ENST00000528672 ATRNL1Q5VV63 1379 aa3.94□□□□□ -1.78
CD44-229ENST00000528672 A0A1W2PPL8 197 aa3.94□□□□□ -1.78
CD44-229ENST00000528672 UBE2QL1A1L167 161 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms