RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 NOGQ13253 232 aa7.41□□□□□ -1.22
PCF11-202ENST00000528336 FOXE3Q13461 319 aa7.41□□□□□ -1.22
PCF11-202ENST00000528336 PUM1Q14671 1186 aaKnown RBP eCLIP7.41□□□□□ -1.22
PCF11-202ENST00000528336 MLC1Q15049 377 aa7.41□□□□□ -1.22
PCF11-202ENST00000528336 PABPC1LQ4VXU2 614 aaKnown RBP7.41□□□□□ -1.22
PCF11-202ENST00000528336 DACT2Q5SW24 774 aa7.41□□□□□ -1.22
PCF11-202ENST00000528336 TSHZ3Q63HK5 1081 aa7.41□□□□□ -1.22
PCF11-202ENST00000528336 CXorf57Q6NSI4 855 aaKnown RBP7.41□□□□□ -1.22
PCF11-202ENST00000528336 SLC4A10Q6U841 1118 aa7.41□□□□□ -1.22
PCF11-202ENST00000528336 HEATR3Q7Z4Q2 680 aa7.41□□□□□ -1.22
PCF11-202ENST00000528336 WDR75Q8IWA0 830 aaKnown RBP7.41□□□□□ -1.22
PCF11-202ENST00000528336 SLC35G2Q8TBE7 412 aa7.41□□□□□ -1.22
PCF11-202ENST00000528336 C1GALT1C1Q96EU7 318 aa7.41□□□□□ -1.22
PCF11-202ENST00000528336 TEX101Q9BY14 249 aa7.41□□□□□ -1.22
PCF11-202ENST00000528336 KMT5AQ9NQR1 393 aa7.41□□□□□ -1.22
PCF11-202ENST00000528336 USP15Q9Y4E8 981 aaPredicted RBP7.41□□□□□ -1.22
PCF11-202ENST00000528336 LOC102724159A0A0B4J2E5 919 aa7.4□□□□□ -1.22
PCF11-202ENST00000528336 ZNF185O15231 689 aa7.4□□□□□ -1.22
PCF11-202ENST00000528336 PRSS23O95084 383 aa7.4□□□□□ -1.22
PCF11-202ENST00000528336 SLC25A3Q00325 362 aa7.4□□□□□ -1.22
PCF11-202ENST00000528336 PWP2Q15269 919 aaKnown RBP7.4□□□□□ -1.22
PCF11-202ENST00000528336 FLYWCH1Q4VC44 716 aa7.4□□□□□ -1.22
PCF11-202ENST00000528336 TMED8Q6PL24 325 aaPredicted RBP7.4□□□□□ -1.22
PCF11-202ENST00000528336 MYO1HQ8N1T3 1032 aa7.4□□□□□ -1.22
PCF11-202ENST00000528336 TBC1D15Q8TC07 691 aa7.4□□□□□ -1.22
PCF11-202ENST00000528336 DIS3LQ8TF46 1054 aaKnown RBP7.4□□□□□ -1.22
PCF11-202ENST00000528336 DCLRE1CQ96SD1 692 aaKnown RBP7.4□□□□□ -1.22
PCF11-202ENST00000528336 PACSIN1Q9BY11 444 aa7.4□□□□□ -1.22
PCF11-202ENST00000528336 ZNF341Q9BYN7 854 aa7.4□□□□□ -1.22
PCF11-202ENST00000528336 ZNF768Q9H5H4 540 aaKnown RBP7.4□□□□□ -1.22
PCF11-202ENST00000528336 ZNF703Q9H7S9 590 aaPredicted RBP7.4□□□□□ -1.22
PCF11-202ENST00000528336 ABCF2Q9UG63 623 aa7.4□□□□□ -1.22
PCF11-202ENST00000528336 CDHR4A6H8M9 788 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 AHRRA9YTQ3 701 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 F2RL2O00254 374 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 TRIM24O15164 1050 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 SLC16A6O15403 523 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 PARNO95453 639 aaKnown RBP7.39□□□□□ -1.23
PCF11-202ENST00000528336 SLC6A4P31645 630 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 HK3P52790 923 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 ZXDCQ2QGD7 858 aaPredicted RBP7.39□□□□□ -1.23
PCF11-202ENST00000528336 PDCD4Q53EL6 469 aaKnown RBP7.39□□□□□ -1.23
PCF11-202ENST00000528336 FAM102AQ5T9C2 384 aaPredicted RBP7.39□□□□□ -1.23
PCF11-202ENST00000528336 METRNLQ641Q3 311 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 B3GNT9Q6UX72 402 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 GDF7Q7Z4P5 450 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 C14orf80Q86SX3 495 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 TCEAL8Q8IYN2 117 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 FITM2Q8N6M3 262 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 MAGEB6Q8N7X4 407 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 IL17RDQ8NFM7 739 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 NLGN4YQ8NFZ3 816 aaPredicted RBP7.39□□□□□ -1.23
PCF11-202ENST00000528336 PPP1R35Q8TAP8 253 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 NEU1Q99519 415 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 CGRRF1Q99675 332 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 ACO2Q99798 780 aaKnown RBP7.39□□□□□ -1.23
PCF11-202ENST00000528336 SLAMF7Q9NQ25 335 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 LMBRD1Q9NUN5 540 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 NR2E3Q9Y5X4 410 aa7.39□□□□□ -1.23
PCF11-202ENST00000528336 H3BUI4 141 aa7.38□□□□□ -1.23
PCF11-202ENST00000528336 CTNND1O60716 968 aaKnown RBP7.38□□□□□ -1.23
PCF11-202ENST00000528336 RPS6KA4O75676 772 aa7.38□□□□□ -1.23
PCF11-202ENST00000528336 ARIH2O95376 493 aa7.38□□□□□ -1.23
PCF11-202ENST00000528336 U2AF1L5P0DN76 240 aaPredicted RBP7.38□□□□□ -1.23
PCF11-202ENST00000528336 FAM189BP81408 668 aa7.38□□□□□ -1.23
PCF11-202ENST00000528336 U2AF1Q01081 240 aaKnown RBP eCLIP7.38□□□□□ -1.23
PCF11-202ENST00000528336 MINDY4Q4G0A6 757 aa7.38□□□□□ -1.23
PCF11-202ENST00000528336 ARHGAP29Q52LW3 1261 aa7.38□□□□□ -1.23
PCF11-202ENST00000528336 UTP14CQ5TAP6 766 aaKnown RBP7.38□□□□□ -1.23
PCF11-202ENST00000528336 NXNQ6DKJ4 435 aa7.38□□□□□ -1.23
PCF11-202ENST00000528336 TAAR9Q96RI9 348 aa7.38□□□□□ -1.23
PCF11-202ENST00000528336 REXO4Q9GZR2 422 aaKnown RBP7.38□□□□□ -1.23
PCF11-202ENST00000528336 ARMT1Q9H993 441 aa7.38□□□□□ -1.23
PCF11-202ENST00000528336 PRDM16Q9HAZ2 1276 aa7.38□□□□□ -1.23
PCF11-202ENST00000528336 FAM30AQ9NZY2 134 aa7.38□□□□□ -1.23
PCF11-202ENST00000528336 SLC45A2Q9UMX9 530 aa7.38□□□□□ -1.23
PCF11-202ENST00000528336 MYRFQ9Y2G1 1151 aa7.38□□□□□ -1.23
PCF11-202ENST00000528336 ATP11BQ9Y2G3 1177 aa7.38□□□□□ -1.23
PCF11-202ENST00000528336 NT5C1B-RDH14C9J2C7 533 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 HAUS5O94927 633 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 AGFG2O95081 481 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 PHKA1P46020 1223 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 LSM12Q3MHD2 195 aaKnown RBP7.37□□□□□ -1.23
PCF11-202ENST00000528336 LCE1DQ5T752 114 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 AGAP9Q5VTM2 703 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 GGNQ86UU5 652 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 DENND1CQ8IV53 801 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 ZNF276Q8N554 614 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 ZBTB34Q8NCN2 500 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 OR56A1Q8NGH5 318 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 CACTINQ8WUQ7 758 aaKnown RBP7.37□□□□□ -1.23
PCF11-202ENST00000528336 ZNF503Q96F45 646 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 MARS2Q96GW9 593 aaKnown RBP7.37□□□□□ -1.23
PCF11-202ENST00000528336 C1orf43Q9BWL3 253 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 VPS11Q9H270 941 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 SLC2A4RGQ9NR83 387 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 CHPF2Q9P2E5 772 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 REXO2Q9Y3B8 237 aaKnown RBP7.37□□□□□ -1.23
PCF11-202ENST00000528336 PCDHA1Q9Y5I3 950 aa7.37□□□□□ -1.23
PCF11-202ENST00000528336 SLC43A1O75387 559 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms