RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 KMT5AQ9NQR1 393 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 AURKAIP1Q9NWT8 199 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-211ENST00000525970 C11orf21Q9P2W6 132 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 PNMA2Q9UL42 364 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 RBM8AQ9Y5S9 174 aaKnown RBP5.59□□□□□ -1.51
CSDE1-211ENST00000525970 NR2E3Q9Y5X4 410 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 F5H423 210 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-211ENST00000525970 PLSCR1O15162 318 aa5.58□□□□□ -1.52
CSDE1-211ENST00000525970 WDHD1O75717 1129 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-211ENST00000525970 GSPT1P15170 499 aaKnown RBP5.58□□□□□ -1.52
CSDE1-211ENST00000525970 HK3P52790 923 aa5.58□□□□□ -1.52
CSDE1-211ENST00000525970 RAB1AP62820 205 aa5.58□□□□□ -1.52
CSDE1-211ENST00000525970 NKX6-1P78426 367 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-211ENST00000525970 ATP2C1P98194 919 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-211ENST00000525970 SEPT2Q15019 361 aa5.58□□□□□ -1.52
CSDE1-211ENST00000525970 IGFL4Q6B9Z1 124 aa5.58□□□□□ -1.52
CSDE1-211ENST00000525970 DAAM2Q86T65 1068 aa5.58□□□□□ -1.52
CSDE1-211ENST00000525970 C1orf210Q8IVY1 113 aa5.58□□□□□ -1.52
CSDE1-211ENST00000525970 ANKS1AQ92625 1134 aa5.58□□□□□ -1.52
CSDE1-211ENST00000525970 LPPQ93052 612 aa5.58□□□□□ -1.52
CSDE1-211ENST00000525970 RGMAQ96B86 450 aa5.58□□□□□ -1.52
CSDE1-211ENST00000525970 CDK5RAP3Q96JB5 506 aa5.58□□□□□ -1.52
CSDE1-211ENST00000525970 OR14A2Q96R54 314 aa5.58□□□□□ -1.52
CSDE1-211ENST00000525970 CRB3Q9BUF7 120 aa5.58□□□□□ -1.52
CSDE1-211ENST00000525970 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-211ENST00000525970 CFAP69A5D8W1 941 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 C2orf78A6NCI8 922 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 MATN2O00339 956 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 SGTAO43765 313 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 MGEA5O60502 916 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 TMEM127O75204 238 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 HNRNPLP14866 589 aaKnown RBP eCLIP5.57□□□□□ -1.525e-8■□□□□ 8.7
CSDE1-211ENST00000525970 XPAP23025 273 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-211ENST00000525970 ACAP1Q15027 740 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 MAN2A1Q16706 1144 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 LMBR1LQ6UX01 489 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 MIGA2Q7L4E1 593 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 TTC7BQ86TV6 843 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 SMAP1Q8IYB5 467 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-211ENST00000525970 CPXCR1Q8N123 301 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 CACTINQ8WUQ7 758 aaKnown RBP5.57□□□□□ -1.52
CSDE1-211ENST00000525970 NKD2Q969F2 451 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-211ENST00000525970 SLC7A6OSQ96CW6 309 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-211ENST00000525970 PAWRQ96IZ0 340 aaKnown RBP5.57□□□□□ -1.52
CSDE1-211ENST00000525970 ZC3H10Q96K80 434 aaKnown RBP5.57□□□□□ -1.52
CSDE1-211ENST00000525970 RPL10LQ96L21 214 aaKnown RBP5.57□□□□□ -1.52
CSDE1-211ENST00000525970 NT5C1BQ96P26 610 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 ADI1Q9BV57 179 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 NELFAQ9H3P2 528 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 RBM12Q9NTZ6 932 aaKnown RBP5.57□□□□□ -1.52
CSDE1-211ENST00000525970 ZNF69Q9UC07 566 aa5.57□□□□□ -1.52
CSDE1-211ENST00000525970 CTDP1Q9Y5B0 961 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-211ENST00000525970 MORC2Q9Y6X9 1032 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-211ENST00000525970 PMS2P1A4D2B8 440 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 NRP2O60462 931 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 FSBPO95073 299 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 FTLP02792 175 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-211ENST00000525970 RPL17P18621 184 aaKnown RBP5.56□□□□□ -1.52
CSDE1-211ENST00000525970 CD53P19397 219 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 TNFSF4P23510 183 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 INHBCP55103 352 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 BPIFB4P59827 614 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 HGFACQ04756 655 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 ZNF543Q08ER8 600 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 NOGQ13253 232 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 THEMIS2Q5TEJ8 643 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 KRT40Q6A162 431 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 PPP4R3AQ6IN85 833 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 ANKRD53Q8N9V6 530 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 PLA2G15Q8NCC3 412 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 OR10H5Q8NGA6 315 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.56□□□□□ -1.52
CSDE1-211ENST00000525970 IL17DQ8TAD2 202 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 CFHR4Q92496 578 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 UIMC1Q96RL1 719 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 SLC6A15Q9H2J7 730 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 ZNF703Q9H7S9 590 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-211ENST00000525970 ZMAT3Q9HA38 289 aaKnown RBP5.56□□□□□ -1.52
CSDE1-211ENST00000525970 GPRC5BQ9NZH0 403 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 PADI4Q9UM07 663 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 PCDHA13Q9Y5I0 950 aa5.56□□□□□ -1.52
CSDE1-211ENST00000525970 A0A1W2PR48 441 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 RHPN2P1A8MT19 583 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 FAM171A2A8MVW0 826 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 MYO1FO00160 1098 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 SLC26A4O43511 780 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 NCK2O43639 380 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 C1SP09871 688 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 PPM1AP35813 382 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 SLC6A9P48067 706 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 ADCY7P51828 1080 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 DGCR2P98153 550 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 MEF2AQ02078 507 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-211ENST00000525970 KRTAP1-1Q07627 177 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 IZUMO3Q5VZ72 239 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 CLEC4GQ6UXB4 293 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 ADGRE4PQ86SQ3 457 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 MYLK4Q86YV6 388 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-211ENST00000525970 GLB1L2Q8IW92 636 aa5.55□□□□□ -1.52
CSDE1-211ENST00000525970 DRC7Q8IY82 874 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms