RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	USP29	Q9HBJ7	922 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	SSU72	Q9NP77	194 aa	Known RBP	4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	CYLD	Q9NQC7	956 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	KRT82	Q9NSB4	513 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	PAG1	Q9NWQ8	432 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	PIM2	Q9P1W9	311 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	TNFRSF10D	Q9UBN6	386 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	LGALS13	Q9UHV8	139 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	DMGDH	Q9UI17	866 aa	Known RBP	4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	CNOT11	Q9UKZ1	510 aa	Known RBP	4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	DNAJC16	Q9Y2G8	782 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	MRPL11	Q9Y3B7	192 aa	Known RBP	4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	HEY1	Q9Y5J3	304 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	ZNFX1	Q9P2E3	1918 aa	Known RBP	4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	ADGRA3	Q8IWK6	1321 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	COL24A1	Q17RW2	1714 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	PKD1L3	Q7Z443	1732 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	CIC	Q96RK0	1608 aa	Predicted RBP	4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	PALLD	Q8WX93	1383 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	ANKRD34B	A5PLL1	514 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288		A8MUI8	341 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288		B8ZZF3	427 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	EXOC3	O60645	756 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	PHF2	O75151	1096 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	FKBP6	O75344	327 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	PRDM1	O75626	825 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	APOE	P02649	317 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	S100A6	P06703	90 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	PDHA1	P08559	390 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	MUT	P22033	750 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	BDNF	P23560	247 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	PPP1R2	P41236	205 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	CHN2	P52757	468 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	AMPD3	Q01432	767 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	GOLGA8F	Q08AF8	430 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	GOLGA8DP	Q0D2H9	430 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	PDAP1	Q13442	181 aa	Known RBP	4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	NR1D2	Q14995	579 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	PUM3	Q15397	648 aa	Known RBP	4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	RTN1	Q16799	776 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	TUBA3E	Q6PEY2	450 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	C1orf228	Q6PIY5	440 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	FAM20C	Q8IXL6	584 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	ELMOD1	Q8N336	334 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	TTLL6	Q8N841	843 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	NECAB1	Q8N987	351 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	SUN5	Q8TC36	379 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	SRPK1	Q96SB4	655 aa	Known RBP	4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	NEURL2	Q9BR09	285 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	GRIP2	Q9C0E4	1043 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	EPS15L1	Q9UBC2	864 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	RAB26	Q9ULW5	256 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	COQ6	Q9Y2Z9	468 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	ATRN	O75882	1429 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	USP6	P35125	1406 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	BCOR	Q6W2J9	1755 aa		4.08	□□□□□ -1.76
FAM49B-225	ENST00000523288	HEXIM1	O94992	359 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	FAM153B	P0C7A2	387 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	UQCRB	P14927	111 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	NFKBIA	P25963	317 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SERPINB3	P29508	390 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	PKLR	P30613	574 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	PHB	P35232	272 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	PRCP	P42785	496 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	TMED10	P49755	219 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	COPB1	P53618	953 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	TBCC	Q15814	346 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	CLEC16A	Q2KHT3	1053 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	FAM153C	Q494X1	144 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SLC45A4	Q5BKX6	768 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	IQSEC1	Q6DN90	963 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	LRRC8B	Q6P9F7	803 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	WDR59	Q6PJI9	974 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SHC4	Q6S5L8	630 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	FRA10AC1	Q70Z53	315 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	TTC30A	Q86WT1	665 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	ADSSL1	Q8N142	457 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	C2orf69	Q8N8R5	385 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	TTLL11	Q8NHH1	800 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	LILRB4	Q8NHJ6	448 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	PTCD3	Q96EY7	689 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	PHACTR3	Q96KR7	559 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	FBXL18	Q96ME1	805 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	TCEANC2	Q96MN5	208 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	CDRT15	Q96T59	188 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	HEPH	Q9BQS7	1158 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	UQCC2	Q9BRT2	126 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SHCBP1L	Q9BZQ2	653 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	AZI2	Q9H6S1	392 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	C10orf88	Q9H8K7	445 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	DBNDD1	Q9H9R9	158 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	RSL24D1	Q9UHA3	163 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	FAM153A	Q9UHL3	310 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	TSC22D4	Q9Y3Q8	395 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	USH1C	Q9Y6N9	552 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	ARFGEF2	Q9Y6D5	1785 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288		A0A0U1RQJ8	604 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	FAM187A	A6NFU0	413 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	PPP1R3G	B7ZBB8	358 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 799.1 ms