RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SCAF4O95104 1147 aaKnown RBP6.53□□□□□ -1.36
SKP1-208ENST00000521216 TYRP14679 529 aa6.53□□□□□ -1.36
SKP1-208ENST00000521216 ACRV1P26436 265 aa6.53□□□□□ -1.36
SKP1-208ENST00000521216 PHKA1P46020 1223 aa6.53□□□□□ -1.36
SKP1-208ENST00000521216 RNASE9P60153 205 aaKnown RBP6.53□□□□□ -1.36
SKP1-208ENST00000521216 ADAM17P78536 824 aa6.53□□□□□ -1.36
SKP1-208ENST00000521216 EFEMP1Q12805 493 aa6.53□□□□□ -1.36
SKP1-208ENST00000521216 GRM3Q14832 879 aa6.53□□□□□ -1.36
SKP1-208ENST00000521216 NRN1LQ496H8 165 aa6.53□□□□□ -1.36
SKP1-208ENST00000521216 SPDYAQ5MJ70 313 aa6.53□□□□□ -1.36
SKP1-208ENST00000521216 SYT12Q8IV01 421 aa6.53□□□□□ -1.36
SKP1-208ENST00000521216 FITM2Q8N6M3 262 aa6.53□□□□□ -1.36
SKP1-208ENST00000521216 MTFMTQ96DP5 389 aaKnown RBP6.53□□□□□ -1.36
SKP1-208ENST00000521216 C1orf43Q9BWL3 253 aa6.53□□□□□ -1.36
SKP1-208ENST00000521216 REXO4Q9GZR2 422 aaKnown RBP6.53□□□□□ -1.36
SKP1-208ENST00000521216 STAP2Q9UGK3 403 aa6.53□□□□□ -1.36
SKP1-208ENST00000521216 CPA4Q9UI42 421 aa6.53□□□□□ -1.36
SKP1-208ENST00000521216 BTBD11A6QL63 1104 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 FAM20BO75063 409 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 RECQL4O94761 1208 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 HAUS5O94927 633 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 GNAI3P08754 354 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 PTTG1IPP53801 180 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 GNAI1P63096 354 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 PLS1Q14651 629 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 R3HDM1Q15032 1099 aaKnown RBP6.52□□□□□ -1.37
SKP1-208ENST00000521216 UTP14CQ5TAP6 766 aaKnown RBP6.52□□□□□ -1.37
SKP1-208ENST00000521216 TSHZ3Q63HK5 1081 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 OVCH2Q7RTZ1 564 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 IL17RDQ8NFM7 739 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 CPT1CQ8TCG5 803 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 FAM167AQ96KS9 214 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 LRFN3Q9BTN0 628 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 WDCPQ9H6R7 721 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 FAM204AQ9H8W3 233 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 PRDM11Q9NQV5 511 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 GNL3LQ9NVN8 582 aaKnown RBP6.52□□□□□ -1.37
SKP1-208ENST00000521216 TRPM5Q9NZQ8 1165 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 GABBR1Q9UBS5 961 aa6.52□□□□□ -1.37
SKP1-208ENST00000521216 USP15Q9Y4E8 981 aaPredicted RBP6.52□□□□□ -1.37
SKP1-208ENST00000521216 KRTAP23-1A1A580 65 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 B8ZZF3 427 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 NT5C1B-RDH14C9J2C7 533 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 TUSC2O75896 110 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 AGFG2O95081 481 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 PRDX5P30044 214 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 SLC6A4P31645 630 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 IL12RB1P42701 662 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 NKX6-1P78426 367 aaPredicted RBP6.51□□□□□ -1.37
SKP1-208ENST00000521216 CCDC93Q567U6 631 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 NAIF1Q69YI7 327 aaPredicted RBP6.51□□□□□ -1.37
SKP1-208ENST00000521216 NPNTQ6UXI9 565 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 CCDC149Q6ZUS6 474 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 AOPEPQ8N6M6 819 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 PLBD2Q8NHP8 589 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 TIFAQ96CG3 184 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 GPR20Q99678 358 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 B3GNT5Q9BYG0 378 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 BRD9Q9H8M2 597 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 SARS2Q9NP81 518 aaKnown RBP6.51□□□□□ -1.37
SKP1-208ENST00000521216 SLC45A2Q9UMX9 530 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 PCDHA6Q9UN73 950 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 TSC22D4Q9Y3Q8 395 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 TESMINQ9Y4I5 508 aa6.51□□□□□ -1.37
SKP1-208ENST00000521216 KIF3BO15066 747 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 PRSS23O95084 383 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 AHSGP02765 367 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 FTH1P19P0C7X4 201 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 PIK3CGP48736 1102 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 PSMC1P62191 440 aaKnown RBP6.5□□□□□ -1.37
SKP1-208ENST00000521216 NOMO3P69849 1222 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 FGL2Q14314 439 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 CDSNQ15517 529 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 ANO6Q4KMQ2 910 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 RABL3Q5HYI8 236 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 KHDC1LQ5JSQ8 128 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 HTR3DQ70Z44 454 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 PPP1R3BQ86XI6 285 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 TMPRSS6Q8IU80 811 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 SH3RF3Q8TEJ3 882 aaPredicted RBP6.5□□□□□ -1.37
SKP1-208ENST00000521216 NT5C1BQ96P26 610 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 KRTAP3-1Q9BYR8 98 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 CNNM1Q9NRU3 951 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 PARPBPQ9NWS1 579 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 AURKAIP1Q9NWT8 199 aaPredicted RBP6.5□□□□□ -1.37
SKP1-208ENST00000521216 JKAMPQ9P055 326 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 ATP11BQ9Y2G3 1177 aa6.5□□□□□ -1.37
SKP1-208ENST00000521216 A0A088AWK7 358 aa6.49□□□□□ -1.37
SKP1-208ENST00000521216 PLSCR1O15162 318 aa6.49□□□□□ -1.37
SKP1-208ENST00000521216 ZNF185O15231 689 aa6.49□□□□□ -1.37
SKP1-208ENST00000521216 SLC43A1O75387 559 aa6.49□□□□□ -1.37
SKP1-208ENST00000521216 GJB1P08034 283 aa6.49□□□□□ -1.37
SKP1-208ENST00000521216 CKBP12277 381 aa6.49□□□□□ -1.37
SKP1-208ENST00000521216 RAB1AP62820 205 aa6.49□□□□□ -1.37
SKP1-208ENST00000521216 NOL8Q76FK4 1167 aaKnown RBP6.49□□□□□ -1.37
SKP1-208ENST00000521216 DGKHQ86XP1 1220 aa6.49□□□□□ -1.37
SKP1-208ENST00000521216 CCAR1Q8IX12 1150 aaKnown RBP6.49□□□□□ -1.37
SKP1-208ENST00000521216 PCSK9Q8NBP7 692 aaKnown RBP6.49□□□□□ -1.37
SKP1-208ENST00000521216 SLC17A8Q8NDX2 589 aa6.49□□□□□ -1.37
SKP1-208ENST00000521216 IL17DQ8TAD2 202 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms