RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 POMGNT1Q8WZA1 660 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 CBWD1Q9BRT8 395 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 RPF1Q9H9Y2 349 aaKnown RBP12.53□□□□□ -0.4
SPIDR-212ENST00000519661 TSHZ2Q9NRE2 1034 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 EXOC1Q9NV70 894 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 CLEC1BQ9P126 229 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 PRG3Q9Y2Y8 225 aaPredicted RBP12.53□□□□□ -0.4
SPIDR-212ENST00000519661 CITO14578 2027 aa12.53□□□□□ -0.4
SPIDR-212ENST00000519661 CASTOR2A6NHX0 329 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 M0QZQ0 153 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 PIRO00625 290 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 TRAPPC3O43617 180 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 TBX10O75333 385 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 KIF20AO95235 890 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 PRR29P0C7W0 189 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 HOXB8P17481 243 aaPredicted RBP12.52□□□□□ -0.41
SPIDR-212ENST00000519661 GLUD2P49448 558 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 CLCNKBP51801 687 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 OSTNP61366 133 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 MRPS5P82675 430 aaKnown RBP12.52□□□□□ -0.41
SPIDR-212ENST00000519661 SEZ6Q53EL9 994 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 RTL10Q7L3V2 364 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 TMC7Q7Z402 723 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 PPFIBP1Q86W92 1011 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 GPD1LQ8N335 351 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 SMRP1Q8NCR6 262 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 SUSD3Q96L08 255 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 ASB2Q96Q27 587 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 GZF1Q9H116 711 aaPredicted RBP12.52□□□□□ -0.41
SPIDR-212ENST00000519661 TLE6Q9H808 572 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 ENTPD7Q9NQZ7 604 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 MRPL17Q9NRX2 175 aaKnown RBP12.52□□□□□ -0.41
SPIDR-212ENST00000519661 HSPBP1Q9NZL4 362 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 BACE2Q9Y5Z0 518 aa12.52□□□□□ -0.41
SPIDR-212ENST00000519661 PODXLO00592 558 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 CLASP2O75122 1294 aaKnown RBP12.51□□□□□ -0.41
SPIDR-212ENST00000519661 B3GAT3O94766 335 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 URODP06132 367 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 POU2F2P09086 479 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 CNPP09543 421 aaKnown RBP12.51□□□□□ -0.41
SPIDR-212ENST00000519661 BMP1P13497 986 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 NRIP1P48552 1158 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 ACOT2P49753 483 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 SURF1Q15526 300 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 RTP2Q5QGT7 225 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 SLC8B1Q6J4K2 584 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 ARMCX5Q6P1M9 558 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 LILRA6Q6PI73 481 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 TAS1R1Q7RTX1 841 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 ZC3H3Q8IXZ2 948 aaKnown RBP12.51□□□□□ -0.41
SPIDR-212ENST00000519661 EFCAB13Q8IY85 973 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 SYCP3Q8IZU3 236 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 CMASQ8NFW8 434 aaPredicted RBP12.51□□□□□ -0.41
SPIDR-212ENST00000519661 LNX1Q8TBB1 728 aaPredicted RBP12.51□□□□□ -0.41
SPIDR-212ENST00000519661 SUSD6Q92537 303 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 C18orf25Q96B23 403 aaPredicted RBP12.51□□□□□ -0.41
SPIDR-212ENST00000519661 MFSD14AQ96MC6 490 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 KLHL5Q96PQ7 755 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 TTPALQ9BTX7 342 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 OXCT2Q9BYC2 517 aaPredicted RBP12.51□□□□□ -0.41
SPIDR-212ENST00000519661 SLC39A2Q9NP94 309 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 RMND1Q9NWS8 449 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 TUBGCP4Q9UGJ1 667 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 HOOK1Q9UJC3 728 aaKnown RBP12.51□□□□□ -0.41
SPIDR-212ENST00000519661 PCDHGC5Q9Y5F6 944 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 HCFC2Q9Y5Z7 792 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 BDP1A6H8Y1 2624 aa12.51□□□□□ -0.41
SPIDR-212ENST00000519661 GADD45BO75293 160 aaPredicted RBP12.5□□□□□ -0.41
SPIDR-212ENST00000519661 TADA2AO75478 443 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 OAZ2O95190 189 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 CXCL14O95715 111 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 NFICP08651 508 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 HARSP12081 509 aaKnown RBP12.5□□□□□ -0.41
SPIDR-212ENST00000519661 IGFBP6P24592 240 aaPredicted RBP12.5□□□□□ -0.41
SPIDR-212ENST00000519661 CLCN4P51793 760 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 WNT7BP56706 349 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 TMEM132DQ14C87 1099 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 PSMD6Q15008 389 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 CCDC85BQ15834 202 aaPredicted RBP12.5□□□□□ -0.41
SPIDR-212ENST00000519661 SNRNP35Q16560 246 aaKnown RBP12.5□□□□□ -0.41
SPIDR-212ENST00000519661 EDRF1Q3B7T1 1238 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 TJAP1Q5JTD0 557 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 PLPP4Q5VZY2 271 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 JADE1Q6IE81 842 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 CYP26C1Q6V0L0 522 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 LIMS2Q7Z4I7 341 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 XXYLT1Q8NBI6 393 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 ZSWIM2Q8NEG5 633 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 BEST2Q8NFU1 509 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 SPATA18Q8TC71 538 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 CASP10Q92851 521 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 CCDC47Q96A33 483 aaKnown RBP12.5□□□□□ -0.41
SPIDR-212ENST00000519661 KIF12Q96FN5 646 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 BORCS6Q96GS4 357 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 EMILIN2Q9BXX0 1053 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 S1PR5Q9H228 398 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 GOLGA2P5Q9HBQ8 144 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 PRDM6Q9NQX0 595 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 DZANK1Q9NVP4 752 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 RBAKQ9NYW8 714 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms