RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 HSP90AA4PQ58FG1 418 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ZBTB41Q5SVQ8 909 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 KRT39Q6A163 491 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PDXDC1Q6P996 788 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ELMSAN1Q6PJG2 1045 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 C11orf57Q6ZUT1 292 aaPredicted RBP5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TRAPPC11Q7Z392 1133 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TMC7Q7Z402 723 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CEP57Q86XR8 500 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 COLGALT1Q8NBJ5 622 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 APPL2Q8NEU8 664 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 FAM200AQ8TCP9 573 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PARD3BQ8TEW8 1205 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TMEM174Q8WUU8 243 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ARNTL2Q8WYA1 636 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 C18orf25Q96B23 403 aaPredicted RBP5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ZNF689Q96CS4 500 aaPredicted RBP5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 FBXL18Q96ME1 805 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MMS19Q96T76 1030 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 DUSP9Q99956 384 aaKnown RBP5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TUBGCP2Q9BSJ2 902 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PLVAPQ9BX97 442 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PBX4Q9BYU1 374 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MTMR12Q9C0I1 747 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 HAPLN2Q9GZV7 340 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 NRDE2Q9H7Z3 1164 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ENTPD7Q9NQZ7 604 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 RNF19AQ9NV58 838 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 INTS13Q9NVM9 706 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 FANCLQ9NW38 375 aa5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MRPL42Q9Y6G3 142 aaKnown RBP5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SF3B1O75533 1304 aaKnown RBP eCLIP5.88□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CENPFP49454 3210 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TMEM265A0A087WTH1 108 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 LINC01553A4QN01 128 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SPDYE4A6NLX3 237 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 LRRIQ3A6PVS8 624 aaPredicted RBP5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 NT5C1B-RDH14C9J2C7 533 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 H7C4K7 107 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PTGESO14684 152 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 NRP1O14786 923 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 INPPL1O15357 1258 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 FGF18O76093 207 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 DDHD2O94830 711 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 KIF4AO95239 1232 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ITGB3P05106 788 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 URODP06132 367 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ADRB2P07550 413 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 GALTP07902 379 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TPM1P09493 284 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TRIM49P0CI25 452 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TRIM49CP0CI26 452 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ODC1P11926 461 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MYOGP15173 224 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 POLR2BP30876 1174 aaKnown RBP5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ATICP31939 592 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 GCLMP48507 274 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SLC11A1P49279 550 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CLCNKBP51801 687 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ZNF445P59923 1031 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 YWHAEP62258 255 aaKnown RBP5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MYL7Q01449 175 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CREMQ03060 361 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 KCNH2Q12809 1159 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 NCOA4Q13772 614 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MAN2A1Q16706 1144 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SGSM1Q2NKQ1 1148 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ZNF699Q32M78 642 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 VWA3BQ502W6 1294 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 EPC2Q52LR7 807 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 XKR4Q5GH76 650 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TCP11X2Q5H9J9 407 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ZNF667Q5HYK9 610 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 LMBRD2Q68DH5 695 aaPredicted RBP5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 FAM109BQ6ICB4 259 aaPredicted RBP5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CRELD2Q6UXH1 353 aaPredicted RBP5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ALKAL1Q6UXT8 129 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ZNF280BQ86YH2 543 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 COLGALT2Q8IYK4 626 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 THEM5Q8N1Q8 247 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 LRRC52Q8N7C0 313 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 RNF214Q8ND24 703 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 FBXL13Q8NEE6 735 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SP7Q8TDD2 431 aaPredicted RBP5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 ANP32BQ92688 251 aaKnown RBP5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TAF4BQ92750 862 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 VWCEQ96DN2 955 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 HPDLQ96IR7 371 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 FAM81BQ96LP2 452 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 PPP1R10Q96QC0 940 aaKnown RBP5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 GAS2L1Q99501 681 aaPredicted RBP5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 POP1Q99575 1024 aaKnown RBP5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 EMILIN2Q9BXX0 1053 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 VPS16Q9H269 839 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 SNX25Q9H3E2 840 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CERS4Q9HA82 394 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 CBX8Q9HC52 389 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 TMEM8AQ9HCN3 771 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 MIOSQ9NXC5 875 aa5.87□□□□□ -1.47
SCARNA16.4-201ENST00000516956 DNAJB4Q9UDY4 337 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms