RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ENTPD1P49961 510 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 ST13P50502 369 aaKnown RBP-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 DSCR9P59020 149 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 IRX6P78412 446 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 SEC23AQ15436 765 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 GEN1Q17RS7 908 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 ZNF484Q5JVG2 852 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 CEP85Q6P2H3 762 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 ARFGAP1Q8N6T3 406 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 WDSUB1Q8N9V3 476 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 PNLDC1Q8NA58 520 aaKnown RBP-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 OR5AN1Q8NGI8 311 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 BTN2A2Q8WVV5 523 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 ASB15Q8WXK1 588 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 LPIN2Q92539 896 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 PHACTR3Q96KR7 559 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 NTPCRQ9BSD7 190 aaKnown RBP-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 CHRDL1Q9BU40 450 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 TRIM55Q9BYV6 548 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 UBP1Q9NZI7 540 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 KCNE5Q9UJ90 142 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 HS3ST3B1Q9Y662 390 aa-0.02□□□□□ -2.41
RNU6-542P-201ENST00000516405 MUC6Q6W4X9 2439 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 ZMYM3Q14202 1370 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 USP31Q70CQ4 1352 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 CARNS1A5YM72 827 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 RASSF10A6NK89 507 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 GOLGA6L22H0YM25 854 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 ERN1O75460 977 aaKnown RBP-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 AMY2AP04746 511 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 DUX4L4P0CJ87 422 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 AMY2BP19961 511 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 GNA15P30679 374 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 ATP12AP54707 1039 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 HSD11B2P80365 405 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 DGKDQ16760 1214 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 IZUMO4Q1ZYL8 232 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 MEX3CQ5U5Q3 659 aaKnown RBP-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 POMZP3Q6PJE2 187 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 RSRC2Q7L4I2 434 aaKnown RBP-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 GTSCR1Q86UQ5 136 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 SUGP2Q8IX01 1082 aaKnown RBP eCLIP-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 FBXL14Q8N1E6 418 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 TMEM145Q8NBT3 493 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 SSH1Q8WYL5 1049 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 FRMD6Q96NE9 622 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 ASB2Q96Q27 587 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 TCF7L2Q9NQB0 619 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 TMEM184CQ9NVA4 438 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 USP25Q9UHP3 1055 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 ZNRF3Q9ULT6 936 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 PCDHGB1Q9Y5G3 927 aa-0.03□□□□□ -2.41
RNU6-542P-201ENST00000516405 TRGV11A0A075B6L2 103 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 FZD9O00144 591 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 NRP1O14786 923 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 TLR2O60603 784 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 SRSF10O75494 262 aaKnown RBP-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 GPANK1O95872 356 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 CTSHP09668 335 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 GJA8P48165 433 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 HLCSP50747 726 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 FXR1P51114 621 aaKnown RBP eCLIP-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 LGALS4P56470 323 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 SLC7A5Q01650 507 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 TM4SF20Q53R12 229 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 SLC35F1Q5T1Q4 408 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 PMS2CLQ68D20 193 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 FSTL4Q6MZW2 842 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 PDXDC1Q6P996 788 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 IGFL3Q6UXB1 125 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 SERINC5Q86VE9 423 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 C11orf53Q8IXP5 236 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 COLGALT2Q8IYK4 626 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 NLGN4XQ8N0W4 816 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 CRACR2BQ8N4Y2 399 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 SLC30A5Q8TAD4 765 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 TFAP2CQ92754 450 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 DYDC2Q96IM9 177 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 ZNF347Q96SE7 839 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 ATOH8Q96SQ7 321 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 FAM118BQ9BPY3 351 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 MANSC1Q9H8J5 431 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 MLXIPLQ9NP71 852 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 POLR3BQ9NW08 1133 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 POU2F3Q9UKI9 436 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 PCDHA7Q9UN72 937 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 GAB2Q9UQC2 676 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 SUPT16HQ9Y5B9 1047 aaKnown RBP-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 ATP23Q9Y6H3 246 aa-0.04□□□□□ -2.42
RNU6-542P-201ENST00000516405 NOTCH1P46531 2555 aa-0.05□□□□□ -2.42
RNU6-542P-201ENST00000516405 ANKRD34BA5PLL1 514 aa-0.05□□□□□ -2.42
RNU6-542P-201ENST00000516405 NOP56O00567 594 aaKnown RBP-0.05□□□□□ -2.42
RNU6-542P-201ENST00000516405 PODXLO00592 558 aa-0.05□□□□□ -2.42
RNU6-542P-201ENST00000516405 URI1O94763 535 aaPredicted RBP-0.05□□□□□ -2.42
RNU6-542P-201ENST00000516405 ALDH1A2O94788 518 aa-0.05□□□□□ -2.42
RNU6-542P-201ENST00000516405 PRSS23O95084 383 aa-0.05□□□□□ -2.42
RNU6-542P-201ENST00000516405 RASGRP1O95267 797 aa-0.05□□□□□ -2.42
RNU6-542P-201ENST00000516405 PPP1R3DO95685 299 aa-0.05□□□□□ -2.42
RNU6-542P-201ENST00000516405 TTLL1O95922 423 aa-0.05□□□□□ -2.42
RNU6-542P-201ENST00000516405 CPP00450 1065 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms