RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	GAGE12H	A6NDE8	117 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	FAM171A2	A8MVW0	826 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SLC16A6	O15403	523 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	UBXN7	O94888	489 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SLPI	P03973	132 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SPATA31D3	P0C874	917 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SLC5A1	P13866	664 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CRHR1	P34998	444 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SCNN1G	P51170	649 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ALDH5A1	P51649	535 aa	Predicted RBP	4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	MGAT5	Q09328	741 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SEMA5A	Q13591	1074 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ANO6	Q4KMQ2	910 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	LY6G5C	Q5SRR4	150 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PPP4R3A	Q6IN85	833 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267		Q6ZRM9	215 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SPATA31D4	Q6ZUB0	917 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CCDC149	Q6ZUS6	474 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	FAM186B	Q8IYM0	893 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PPM1N	Q8N819	430 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	FAM156A	Q8NDB6	213 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	HDAC10	Q969S8	669 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CDC5L	Q99459	802 aa	Known RBP	4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	NAA15	Q9BXJ9	866 aa	Known RBP	4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SLC46A2	Q9BY10	475 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	UBA5	Q9GZZ9	404 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ENKD1	Q9H0I2	346 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PRDM12	Q9H4Q4	367 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	GREM2	Q9H772	168 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PLCB1	Q9NQ66	1216 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SCOC	Q9UIL1	159 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	INTU	Q9ULD6	942 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	DAAM1	Q9Y4D1	1078 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	KLRG2	A4D1S0	409 aa	Predicted RBP	4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CAPN8	A6NHC0	703 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CCDC154	A6NI56	674 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	FRS3	O43559	492 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SETSIP	P0DME0	302 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	RPL17	P18621	184 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	EDNRB	P24530	442 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	HTR1B	P28222	390 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	MCAM	P43121	646 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	BLOC1S1	P78537	153 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	GPSM2	P81274	684 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CDK17	Q00537	523 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	BTK	Q06187	659 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CD69	Q07108	199 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	MGAT2	Q10469	447 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	KLF10	Q13118	480 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	IFIT5	Q13325	482 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	KIAA0753	Q2KHM9	967 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	FAM83B	Q5T0W9	1011 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	MIGA2	Q7L4E1	593 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	MRGPRG	Q86SM5	289 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ULK2	Q8IYT8	1036 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ZNF276	Q8N554	614 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	MB21D1	Q8N884	522 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ACRBP	Q8NEB7	543 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PPP1R35	Q8TAP8	253 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ZNF480	Q8WV37	535 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	NEU4	Q8WWR8	484 aa	Predicted RBP	4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PPM1E	Q8WY54	764 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PGBD4	Q96DM1	585 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ADI1	Q9BV57	179 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	NUP62CL	Q9H1M0	184 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	FZD1	Q9UP38	647 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	LIMCH1	Q9UPQ0	1083 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	STXBP5L	Q9Y2K9	1186 aa		4.24	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	FOXN3	O00409	490 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SGTA	O43765	313 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	MGEA5	O60502	916 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PRAMEF4	O60810	478 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PQBP1	O60828	265 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	EIF5B	O60841	1220 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	TCEA3	O75764	348 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ALDH2	P05091	517 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ITGB1	P05556	798 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	HLA-DOA	P06340	250 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ZKSCAN1	P17029	563 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SERPINB3	P29508	390 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	INHBE	P58166	350 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	RAPGEF1	Q13905	1077 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	TMEM95	Q3KNT9	176 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	INO80D	Q53TQ3	878 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	NPNT	Q6UXI9	565 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	LRRC55	Q6ZSA7	311 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SRL	Q86TD4	932 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	DPP9	Q86TI2	863 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	TTC7B	Q86TV6	843 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PLXDC1	Q8IUK5	500 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PIK3C3	Q8NEB9	887 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	OR52N2	Q8NGI0	321 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ZFP28	Q8NHY6	868 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SNX33	Q8WV41	574 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	NRG4	Q8WWG1	115 aa		4.23	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CDK5RAP3	Q96JB5	506 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms